UCSF

ZINC03792789

Substance Information

In ZINC since Heavy atoms Benign functionality
December 3rd, 2005 22 Yes

CAS Number: 4759-48-2

Other Names:

(13-cis)-Retinoate;(13-cis)-Retinoic acid;13-cis-Retinoate;13-cis-Retinoic acid;13-cis-Vitamin A acid;Accutane;Accutane (TN);Amnesteem;CIP-Isotretinoin;cis-Retinoate;cis-Retinoic acid;Claravis;Isotretinoin;Isotretinoin (USP);Isotretinoin [USAN:BAN:INN];Is

(13cis)-retinoic acid

(2Z,4E,6E,8E)-3,7-dimethyl-9-(2,6,6-trimethylcyclohexen-1-yl)nona-2,4,6,8-tetraenoic acid

(2Z,4E6E,8E)-3,7-dimethyl-9-(2,6,6-trimethylcyclohex-1-en-1-yl)nona-2,4,6,8-tetraenoic acid

(7E,9E,11E,13Z)-retinoic acid

(7E,9E,11E,13Z)-retinoic acid; 13-RA; 13-cis-Vitamin A acid; 13-cis-retinoic acid; Neovitamin A acid; cis-RA; isotretinoino

retin-

13 cis retinoic acid

13 cis retinoic acid; 13-RA; 13-cis-Vitamin A acid; 13-cis-retinoic acid; 3,7-Dimethyl-9-(2,6,6-trimethyl-1-cyclohexen-1-yl)2-cis-4-trans-6-trans-8-trans-nonatetraenoic acid; ACCUTANE; BRN 1885770; C20H28O2; CCRIS 4286; Claravis; EINECS 225-296-0; HSDB 39

13 Cis-Retinoic Acid

13-cis RA

13-cis retinoic acid

13-cis-retinoate; CPD-13548

13-cis-retinoic acid

13-cis-Retinoic acid, 99%

13-cis-retinoic acid,Isotretinoin

13-cis-Retinoic acid; 4759-48-2; C07058

13-cis-Retinoic acid; CPD000471891; Isotretinoin; SAM002548955

13-cis-Vitamin A acid

13-RA

3,7-Dimethyl-9-(2,6,6-trimethyl-1-cyclohexen-1-yl)2-cis-4-trans-6-trans-8-trans-nonatetraenoic acid

4-09-00-02388 (Beilstein Handbook Reference)

4759-48-2

4759-48-2; Absorica (TN); Accutane (TN); D00348; Isotretinoin (USP); Sotret (TN)

4759-48-2; Isotretinoin; Prestwick_642

97950-17-9

Absorica

AC-15388

AC1NQZZ4

ACCUTANE

Accutane (TN)

Accutane Roche

Accutane; Amnesteem; Claravis

Ambap302-79-4

Amnesteem

BAN

BML2-E07

BPBio1_000080

BRD-K76723084-001-05-9

BRN 1885770

BSPBio_000072

BSPBio_001331

BSPBio_003345

CCRIS 4286

CHEBI:6067

CHEMBL547

CID5282379

CIP-Isotretinoin

Claravis

CPD000471891

CPD000471891; Isotretinoin; SAM002548955

D00348

D015474

DAP000009

EINECS 225-296-0

EU-0101081

FDA

HMS1361C13

HMS1568D14

HMS1791C13

HMS1921D08

HMS1989C13

HMS2092N07

HSDB 3929

IDI1_033801

INN

Isotane

Isotretinoin

Isotretinoin (BAN

Isotretinoin (FDA

Isotretinoin (USP)

Isotretinoin Retinoic acid

Isotretinoin Zinc Salt, 13 cis Isomer

Isotretinoin Zinc Salt, 13-cis-Isomer

Isotretinoin [USAN:INN:BAN]

isotretinoin; isotretinoina; isotretinoine; isotretinoinum

Isotretinoine

Isotretinoine [INN-French]

isotretinoino

Isotretinoino [INN-Spanish]

Isotretinoinum

Isotretinoinum [INN-Latin]

Isotrex

LMPR01090021

LS-143465

MFCD00079542

MLS001074662

MolPort-003-666-394

NCGC00094358-01

NCGC00094358-02

NCGC00094358-03

NCGC00094358-04

NCGC00094358-05

NCGC00094358-06

NCGC00094358-07

NCGC00094358-08

NCGC00094358-09

NCGC00094358-13

Neovitamin A acid

Prestwick2_000256

Prestwick3_000256

Prestwick_642

R 3255

R3255_SIGMA

Retinoic acid, (13cis)-

RETINOIC ACID, 13-cis-

Retinoic acid, cis-

Ro 4 3780

Ro 4-3780

Ro 43780

Ro-4-3780

Ro-43780

Roaccutan

Roaccutane

Roacutan

SAM002548955

SMR000471891

Sotret

Sotret (TN)

SPECTRUM1502013

Spectrum5_001795

Spectrum5_001937

Teriosal

UNII-EH28UP18IF

USAN

USAN)

USP

USP)

Download: MOL2 SDF SMILES Flexibase

Physical Representations

Type pH range xlogP Des A‑Pol Apolar desolvation (kcal/mol) Des Pol Polar desolvation (kcal/mol) H Don H-bond donors H Acc H-bond acceptors Chg Net charge tPSA (Ų) MWT Molecular weight (g/mol) RB Rotatable bonds DL
Ref Reference (pH 7) 5.80 11.46 -59.02 0 2 -1 40 299.434 5
Lo Low (pH 4.5-6) 5.80 10.89 -7.23 1 2 0 37 300.442 5

Vendor Notes

Note Type Comments Provided By
Mp [°C] 174 - 177 Acros Organics
ALOGPS_SOLUBILITY 4.77e-03 g/l DrugBank-approved
Purity >95% Fluorochem
Therapy antiacne, anticancer SMDC Iconix
therap antiacne, antineoplastic MicroSource Spectrum
Patent Database Links EP0769300; EP1647256; EP1762241; EP1772452; EP1839656; EP1900369; GB2208601; US2005014759; US2005085539; US2005137213; US2005192351; US2006035945; US2007189977; US2007190160; US2007196323; US2007196330; US2007196452; US2007196453; US2007196459; US20072080 ChEBI
H phrase H319: Causes serious eye irritation Acros Organics
H phrase H319: Causes serious eye irritation; H335: May cause respiratory irritation; H315: Causes skin irritation; H360D: May damage the unborn child Acros Organics
PUBCHEM_SUBSTANCE_COMMENT NCC_SAMPLE_SUPPLIER : Enamine; NCC_SUPPLIER_STRUCTURE_ID : 207689613 NIH Clinical Collection via PubChem
P phrase P201: Obtain special instructions before use Acros Organics
P phrase P201: Obtain special instructions before use; P308 + P313: IF exposed or concerned: Get medical advice/attention; P261: Avoid breathing dust/fume/gas/mist/vapors/spray; P302+ P352: IF ON SKIN: Wash with plenty of soap and water; P280: Wear protective glov Acros Organics
R phrase R61: May cause harm to the unborn child. Acros Organics
R phrase R61: May cause harm to the unborn child.; R36/37/38: Irritating to eyes, respiratory system and skin. Acros Organics
S phrase S53: Avoid exposure - obtain special instructions before use. Acros Organics
S phrase S53: Avoid exposure - obtain special instructions before use.; S26: In case of contact with eyes, rinse immediately with plenty of water and seek medical advice.; S37/39: Wear suitable gloves and eye/face protection.; S45: In case of accident or if you fe Acros Organics
PUBCHEM_SUBSTANCE_COMMENT SAMPLE_SUPPLIER: Enamine; SUPPLIER_STRUCTURE_ID: 207689613 NIH Clinical Collection via PubChem
Hazard T: Toxic Acros Organics

Activity (Go SEA)

Clustered Target Annotations
Code Description Organism Class Affinity (nM) LE (kcal/mol/atom) Type
RABP1-1-E Cellular Retinoic Acid-binding Protein I (cluster #1 Of 1), Eukaryotic Eukaryotes 900 0.38 Binding ≤ 10μM
Z50425-4-O Plasmodium Falciparum (cluster #4 Of 22), Other Other 10000 0.32 Functional ≤ 10μM
ChEMBL Target Annotations
Uniprot Swissprot Description Affinity (nM) LE (kcal/mol/atom) Type
RABP1_CHICK P40220 Cellular Retinoic Acid-binding Protein I, Chick 900 0.38 Binding ≤ 1μM
RABP1_CHICK P40220 Cellular Retinoic Acid-binding Protein I, Chick 900 0.38 Binding ≤ 10μM
Z50425 Z50425 Plasmodium Falciparum 10000 0.32 Functional ≤ 10μM

Reactome Annotations from Targets (via Uniprot)

Description Species
Import of palmitoyl-CoA into the mitochondrial matrix
Regulation of pyruvate dehydrogenase (PDH) complex

Analogs ( Draw Identity 99% 90% 80% 70% )