UCSF

ZINC08214692

Substance Information

In ZINC since Heavy atoms Benign functionality
July 4th, 2006 32 Yes

CAS Numbers: 32986-56-4 , 79645-27-5 , [79645-27-5]

Other Names:

(1S,2S,3R,4S,6R)-4,6-Diamino-3-[(2,6-diamino-2,3,6-trideoxy-alpha-D-ribo-hexopyranosyl)oxy]-2-hydroxycyclohexyl 3-amino-3-deoxy-alpha-D-glucopyranoside sulfate (1:1)

mycin

1-Epitobramycin sulfate; D-Streptamine, O-3-amino-3-deoxy-alpha-D-glucopyranosyl-(1-6)-O-(2,6-diamino-2,3,6-trideoxy-alpha-D-ribohexopyranosyl-(1-4))-2-deoxy-, sulfate (2:5)(salt); Distobram; EINECS 256-499-2; Gernebcin; LS-146941; Mixture Name; Nebcin; N

3'-Deoxykanamycin B

3'-Deoxykanamycin B; 32986-56-4; C00397; Nebramycin factir 6; Tobramycin

3'-Deoxykanamycin B;SPRC-AB01;Tobramycin solution for inhalation;Tobramycin Sulfate

32986-56-4; D00063; TOB; Tobracin (TN); Tobramycin (JP16/USP); Tobrex (TN)

47663

79645-27-5; D02542; Nebcin (TN); Tobramycin sulfate (USP)

Aktob

BAN

CHEBI:45933; CHEBI:9610; CHEBI:19849

CPD000058793; SAM001246911; TOBRAMYCIN

Dartobcin

Distobram

FDA

FLUOROMETHOLONE ACETATE; LS-187960; TOBRAMYCIN; TOBRASONE

Gernebcin

INN

JAN

LS-187329

MFCD00077885

Nebcin

Nebicin

Nebramycin

Nebramycin 6

Nebramycin 6; O-3-Amino-3-deoxy-alpha-D-glucopyranosyl-(1-4)-O-(2,6-diamino-2,3,6-trideoxy-alpha-D-ribohexopyranosyl-(1-4))-2-deoxy-D-streptamine; Tobracin (TN); Tobrex (TN)

Nebramycin Factir 6

Nebramycin Factor 6

Nebramycin Vi

NF 6

Obracin

Obramycin

SPRC-AB01

Sybryx

Tenebrimycin

Tenemycin

Tobi

Tobracin

Tobradex

Tobradistin

Tobramaxin

Tobramitsetin

Tobramycetin

Tobramycin (BAN

Tobramycin (FDA

Tobramycin base

tobramycin solution for inhalation

Tobramycin Sulfate

tobramycin(5+)

Tobrasone

Tobrex

USAN

USP)

USP); Tobramycin Sulfate (FDA

Download: MOL2 SDF SMILES Flexibase

Physical Representations

Type pH range xlogP Des A‑Pol Apolar desolvation (kcal/mol) Des Pol Polar desolvation (kcal/mol) H Don H-bond donors H Acc H-bond acceptors Chg Net charge tPSA (Ų) MWT Molecular weight (g/mol) RB Rotatable bonds DL
Ref Reference (pH 7) -5.70 -18.36 -415.88 20 14 5 276 472.56 6
Hi High (pH 8-9.5) -5.70 -19.41 -127.49 17 14 2 271 469.536 6
Hi High (pH 8-9.5) -5.70 -19.38 -111.17 17 14 2 271 469.536 6
Mid Mid (pH 6-8) -5.70 -18.66 -304.45 19 14 4 275 471.552 6
Mid Mid (pH 6-8) -5.70 -18.77 -323.19 19 14 4 275 471.552 6

Vendor Notes

Note Type Comments Provided By
ALOGPS_SOLUBILITY 5.37e+01 g/l DrugBank-approved
UniProt Database Links AAC2_MYCFO; AAC31_SALSP; AAC32_SALSP; AAC3_SERMA; AAC6C_SERMA; AAC6_ACIBA; AAC6_ACIG1; AAC6_ACIHA; AAC6_CITKO; AAC6_MORMO; AAC6_SALEN; AAC6_STEMA; AACA_ENTFA; AACA_ENTFC; AACA_STAAM; AACA_STAAU; AACA_STAEQ; AACA_STAHJ; AACA_STASC; AACA_STAWA; AACC2_ACIBA ChEBI
Therapy antibacterial, inhibits protein synthesis SMDC MicroSource
Indications antibiotic KeyOrganics Bioactives
PUBCHEM_PATENT_ID EP0000380A1; EP0000392A2; EP0000800A1; EP0001567A1; EP0001643A2; EP0004925A1; EP0005956A1; EP0007690A1; EP0009197A1; EP0009670A1; EP0016906A1; EP0017908A1; EP0025495A1; EP0025698A2; EP0025912A1; EP0027258A1; EP0032286A2; EP0034347A2; EP0037814A1; EP003869 IBM Patent Data
Patent Database Links EP1452533; EP1459763; EP1537861; EP1588702; EP1598059; EP1607103; EP1611877; EP1671624; EP1681065; EP1683526; EP1754712; EP1839648; EP1847256; EP1849463; EP1849797; EP1938822; EP1958956; EP1990639; EP1994930; US2003105066; US2005009921; US2005038008; US20 ChEBI
PUBCHEM_SUBSTANCE_COMMENT NCC_SAMPLE_SUPPLIER : Sigma Chemical Company; NCC_SUPPLIER_STRUCTURE_ID : T4014 NIH Clinical Collection via PubChem
PUBCHEM_SUBSTANCE_COMMENT SAMPLE_SUPPLIER: Sigma Chemical Company; SUPPLIER_STRUCTURE_ID: T4014 NIH Clinical Collection via PubChem

Activity (Go SEA)

Clustered Target Annotations
Code Description Organism Class Affinity (nM) LE (kcal/mol/atom) Type
Z100263-1-O Ribosomal RNA A-site (cluster #1 Of 1), Other Other 1500 0.25 Binding ≤ 10μM
Q77YF8-1-V Human Immunodeficiency Virus Type 1 REV (cluster #1 Of 1), Viral Viruses 4110 0.24 Functional ≤ 10μM
ChEMBL Target Annotations
Uniprot Swissprot Description Affinity (nM) LE (kcal/mol/atom) Type
Z100263 Z100263 Ribosomal RNA A-site 1500 0.25 Binding ≤ 10μM
Q77YF8_9HIV1 Q77YF8 Human Immunodeficiency Virus Type 1 REV, 9hiv1 4110 0.24 Functional ≤ 10μM

Analogs ( Draw Identity 99% 90% 80% 70% )