UCSF

ZINC14954750

Substance Information

In ZINC since Heavy atoms Benign functionality
July 18th, 2008 30 No

Other Names:

Efegatran

Download: MOL2 SDF SMILES Flexibase

Physical Representations

Type pH range xlogP Des A‑Pol Apolar desolvation (kcal/mol) Des Pol Polar desolvation (kcal/mol) H Don H-bond donors H Acc H-bond acceptors Chg Net charge tPSA (Ų) MWT Molecular weight (g/mol) RB Rotatable bonds DL
Ref Reference (pH 7) -0.05 7 -87.47 8 9 2 147 418.542 12
Ref Reference (pH 7) -0.18 7.05 -87.6 8 9 2 149 418.542 11
Hi High (pH 8-9.5) -0.18 5.77 -59 7 9 1 145 417.534 11
Mid Mid (pH 6-8) -0.05 6.02 -56.05 7 9 1 142 417.534 12

Activity (Go SEA)

Clustered Target Annotations
Code Description Organism Class Affinity (nM) LE (kcal/mol/atom) Type
THRB-1-E Prothrombin (cluster #1 Of 8), Eukaryotic Eukaryotes 85 0.33 Binding ≤ 10μM
TRY1-3-E Trypsin I (cluster #3 Of 5), Eukaryotic Eukaryotes 9 0.38 Binding ≤ 10μM
Z50587-4-O Homo Sapiens (cluster #4 Of 9), Other Other 83 0.33 Functional ≤ 10μM
ChEMBL Target Annotations
Uniprot Swissprot Description Affinity (nM) LE (kcal/mol/atom) Type
THRB_HUMAN P00734 Thrombin, Human 18 0.36 Binding ≤ 1μM
TRY1_BOVIN P00760 Trypsin I, Bovin 9.1 0.38 Binding ≤ 1μM
THRB_HUMAN P00734 Thrombin, Human 18 0.36 Binding ≤ 10μM
TRY1_BOVIN P00760 Trypsin I, Bovin 9.1 0.38 Binding ≤ 10μM
Z50587 Z50587 Homo Sapiens 83 0.33 Functional ≤ 10μM

Reactome Annotations from Targets (via Uniprot)

Description Species
Cell surface interactions at the vascular wall
Common Pathway
G alpha (q) signalling events
Gamma-carboxylation of protein precursors
Intrinsic Pathway
Peptide ligand-binding receptors
Platelet Aggregation (Plug Formation)
Regulation of Insulin-like Growth Factor (IGF) transport and uptake by Insulin-l
Removal of aminoterminal propeptides from gamma-carboxylated proteins
Thrombin signalling through proteinase activated receptors (PARs)
Transport of gamma-carboxylated protein precursors from the endoplasmic reticulu

Analogs ( Draw Identity 99% 90% 80% 70% )