UCSF

ZINC13471218

Substance Information

In ZINC since Heavy atoms Benign functionality
June 20th, 2008 37 Yes

Download: MOL2 SDF SMILES Flexibase

Physical Representations

Type pH range xlogP Des A‑Pol Apolar desolvation (kcal/mol) Des Pol Polar desolvation (kcal/mol) H Don H-bond donors H Acc H-bond acceptors Chg Net charge tPSA (Ų) MWT Molecular weight (g/mol) RB Rotatable bonds DL
Ref Reference (pH 7) 6.02 13.29 -14 2 4 0 54 501.552 7
Lo Low (pH 4.5-6) 6.02 14.9 -118.87 4 4 2 60 503.568 7

Activity (Go SEA)

Clustered Target Annotations
Code Description Organism Class Affinity (nM) LE (kcal/mol/atom) Type
APOB-1-E Apolipoprotein B-100 (cluster #1 Of 1), Eukaryotic Eukaryotes 2 0.33 Binding ≤ 10μM
MTP-1-E Microsomal Triglyceride Transfer Protein Large Subunit (cluster #1 Of 1), Eukaryotic Eukaryotes 2350 0.21 Binding ≤ 10μM
SMO-1-E Smoothened Homolog (cluster #1 Of 1), Eukaryotic Eukaryotes 110 0.26 Binding ≤ 10μM
SMO-1-E Smoothened Homolog (cluster #1 Of 1), Eukaryotic Eukaryotes 120 0.26 Binding ≤ 10μM
ChEMBL Target Annotations
Uniprot Swissprot Description Affinity (nM) LE (kcal/mol/atom) Type
APOB_HUMAN P04114 Apolipoprotein B-100, Human 1.7 0.33 Binding ≤ 1μM
MTP_HUMAN P55157 Microsomal Triglyceride Transfer Protein Large Subunit, Human 100 0.26 Binding ≤ 1μM
SMO_HUMAN Q99835 Smoothened Homolog, Human 120 0.26 Binding ≤ 1μM
SMO_MOUSE P56726 Smoothened Homolog, Mouse 57 0.27 Binding ≤ 1μM
APOB_HUMAN P04114 Apolipoprotein B-100, Human 1.7 0.33 Binding ≤ 10μM
MTP_HUMAN P55157 Microsomal Triglyceride Transfer Protein Large Subunit, Human 100 0.26 Binding ≤ 10μM
SMO_HUMAN Q99835 Smoothened Homolog, Human 120 0.26 Binding ≤ 10μM
SMO_MOUSE P56726 Smoothened Homolog, Mouse 57 0.27 Binding ≤ 10μM

Reactome Annotations from Targets (via Uniprot)

Description Species
Cell surface interactions at the vascular wall
Chylomicron-mediated lipid transport
Class B/2 (Secretin family receptors)
LDL-mediated lipid transport
Platelet sensitization by LDL
Retinoid metabolism and transport
Scavenging by Class A Receptors
Scavenging by Class B Receptors
Scavenging by Class F Receptors
Scavenging by Class H Receptors

Analogs ( Draw Identity 99% 90% 80% 70% )