UCSF

ZINC01529253

Substance Information

In ZINC since Heavy atoms Benign functionality
October 6th, 2004 7 Yes

Other Names:

"1,5-Diaminopentane, 98%"

1,5-Diaminopentane

1,5-DiaMinopentane Dihydrochloride

1,5-Diaminopentane dihydrochloride; 1,5-Pentamethylenediamine; 1,5-Pentanediamine; Cadaverin; Cadaverine dihydrochloride; Pentamethylenediamine; Pentamethylenediamine dihydrochloride; Pentane-1,5-diamine; 1,5-Diaminopentane

1,5-diaminopentane dihydrochloride; N,N'-dimethyltrimethylenediammonium dichloride; N,N'-pentane-1,5-diyldiammonium dichloride; cadaverine hydrochloride; cadaverinium dichloride; pentane-1,5-diaminium dichloride

1,5-Diaminopentane, 98%

1,5-Diaminopentane; 1,5-Diaminopentane dihydrochloride; 1,5-Pentamethylenediamine; 1,5-Pentanediamine; Cadaverin; Cadaverine dihydrochloride; Pentamethylenediamine; Pentamethylenediamine dihydrochloride; Pentane-1,5-diamine

1,5-Diaminopentane; 1,5-Pentamethylenediamine; 1,5-Pentanediamine; AI3-26937; Animal coniine; BRN 1697256; Cadaverin; Cadaverine; EINECS 207-329-0; LS-101555; Pentamethylenediamine

1,5-Diaminopentane; 1,5-Pentamethylenediamine; 1,5-Pentanediamine; AI3-26937; Animal coniine; BRN 1697256; Cadaverin; Cadaverine; Pentamethylenediamine; bmse000072

1,5-Diaminopentane; 1,5-pentanediamine; 462-94-2; BioDex 1-; cadaverine; diaminopentane; pentamethylenediamine

1,5-Diaminopentane; 1,5-Pentanediamine; 462-94-2; C01672; Cadaverine; Pentamethylenediamine

1,5-Diaminopentane;1,5-Diaminopentane dihydrochloride;1,5-Pentamethylenediamine;1,5-Pentanediamine;Cadaverin;Cadaverine dihydrochloride;Pentamethylenediamine;Pentamethylenediamine dihydrochloride;Pentane-1,5-diamine

1,5-pentamethylenediamine; DAPE

1,5-Pentanediamine

Cadavarine

cadaverine

Cadaverine dihydrochloride

cadaverine(2+)

cadaverine; pentane-1,5-diaminium

CHEBI:44370; CHEBI:3288; CHEBI:13928; CHEBI:22974

DNC011080

Ethyl 2-(hydroxymethyl)acrylate

MFCD00008239

MFCD00012527

NA

Pentane-1,5-diamine dihydrochloride

Download: MOL2 SDF SMILES Flexibase

Annotations

Vendors

Physical Representations

Type pH range xlogP Des A‑Pol Apolar desolvation (kcal/mol) Des Pol Polar desolvation (kcal/mol) H Don H-bond donors H Acc H-bond acceptors Chg Net charge tPSA (Ų) MWT Molecular weight (g/mol) RB Rotatable bonds DL
Ref Reference (pH 7) -1.03 -0.77 -93.66 6 2 2 55 104.197 4

Vendor Notes

Note Type Comments Provided By
MP 14-16° Oakwood Chemical
BP [°C] 178 - 180 Acros Organics
Boiling_Point 178-180? Alfa-Aesar
Boiling_Point 178-180° Alfa-Aesar
ALOGPS_SOLUBILITY 8.91e+01 g/l DrugBank-experimental
Mp [°C] 9 Acros Organics
purity 9.500000000000000e+001 Enamine Building Blocks Enamine Building Blocks
Purity 95% Fluorochem
Melting_Point 9? Alfa-Aesar
Melting_Point Alfa-Aesar
UniProt Database Links AAXC_CHLPN; DAPE1_ALTMD; DAPE1_RUEST; DAPE1_SHELP; DAPE2_ALTMD; DAPE2_RUEST; DAPE2_SHELP; DAPE_ACIAC; DAPE_ACIAD; DAPE_ACIB3; DAPE_ACIB5; DAPE_ACIBC; DAPE_ACIBS; DAPE_ACIBT; DAPE_ACIBY; DAPE_ACICJ; DAPE_ACIET; DAPE_ACIF2; DAPE_ACIF5; DAPE_ACISJ; DAPE_ACTP ChEBI
UniProt Database Links AAXC_CHLPN; DCLO_SELRU; DCLY_HAFAL; DCLZ_ECOLI; LDCI_ECO57; LDCI_ECOLI; LDCI_SALTI; LDCI_SALTY; NSPC_VIBCL; PAO3_ARATH; PAT_CITK8; PAT_CROS8; PAT_ECO24; PAT_ECO27; PAT_ECO45; PAT_ECO55; PAT_ECO57; PAT_ECO5E; PAT_ECO7I; PAT_ECO81; PAT_ECO8A; PAT_ECOBW; PAT ChEBI
Hazard C: Corrosive Acros Organics
Patent Database Links EP1422218; EP1754712; EP1985309; US2004097399; US2005085630; US2006094042; US2007184151; US2007265349; US2008032417; WO2005037210; WO2005121107 ChEBI
H phrase H318: Causes serious eye damage Acros Organics
H phrase H318: Causes serious eye damage; H314: Causes severe skin burns and eye damage Acros Organics
P phrase P301 + P330 + P331: IF SWALLOWED: rinse mouth. Do NOT induce vomiting Acros Organics
P phrase P301 + P330 + P331: IF SWALLOWED: rinse mouth. Do NOT induce vomiting; P280: Wear eye protection/face protection; P305 + P351 + P338: IF IN EYES: Rinse cautiously with water for several minutes. Remove contact lenses, if present and easy to do. Continue r Acros Organics
R phrase R34: Causes burns. Acros Organics
S phrase S25: Avoid contact with eyes. Acros Organics
S phrase S25: Avoid contact with eyes.; S36/37/39: Wear suitable protective clothing, gloves and eye/face protection.; S45: In case of accident or if you feel unwell, seek medical advice immediately (show the label where possible). Acros Organics

Activity (Go SEA)

Clustered Target Annotations
Code Description Organism Class Affinity (nM) LE (kcal/mol/atom) Type
CAH12-3-E Carbonic Anhydrase XII (cluster #3 Of 9), Eukaryotic Eukaryotes 450 1.27 Binding ≤ 10μM
CAH13-5-E Carbonic Anhydrase XIII (cluster #5 Of 7), Eukaryotic Eukaryotes 630 1.24 Binding ≤ 10μM
CAH14-2-E Carbonic Anhydrase XIV (cluster #2 Of 8), Eukaryotic Eukaryotes 500 1.26 Binding ≤ 10μM
CAH15-3-E Carbonic Anhydrase 15 (cluster #3 Of 6), Eukaryotic Eukaryotes 650 1.24 Binding ≤ 10μM
CAH3-3-E Carbonic Anhydrase III (cluster #3 Of 6), Eukaryotic Eukaryotes 500 1.26 Binding ≤ 10μM
CAH4-2-E Carbonic Anhydrase IV (cluster #2 Of 16), Eukaryotic Eukaryotes 52 1.46 Binding ≤ 10μM
CAH5A-4-E Carbonic Anhydrase VA (cluster #4 Of 10), Eukaryotic Eukaryotes 44 1.47 Binding ≤ 10μM
CAH5B-5-E Carbonic Anhydrase VB (cluster #5 Of 9), Eukaryotic Eukaryotes 540 1.25 Binding ≤ 10μM
CAH6-3-E Carbonic Anhydrase VI (cluster #3 Of 8), Eukaryotic Eukaryotes 740 1.23 Binding ≤ 10μM
CAH7-3-E Carbonic Anhydrase VII (cluster #3 Of 8), Eukaryotic Eukaryotes 420 1.28 Binding ≤ 10μM
CAH9-4-E Carbonic Anhydrase IX (cluster #4 Of 11), Eukaryotic Eukaryotes 380 1.28 Binding ≤ 10μM
ChEMBL Target Annotations
Uniprot Swissprot Description Affinity (nM) LE (kcal/mol/atom) Type
CAH15_MOUSE Q99N23 Carbonic Anhydrase 15, Mouse 650 1.24 Binding ≤ 1μM
CAH3_HUMAN P07451 Carbonic Anhydrase III, Human 500 1.26 Binding ≤ 1μM
CAH4_HUMAN P22748 Carbonic Anhydrase IV, Human 52 1.46 Binding ≤ 1μM
CAH9_HUMAN Q16790 Carbonic Anhydrase IX, Human 380 1.28 Binding ≤ 1μM
CAH5A_HUMAN P35218 Carbonic Anhydrase VA, Human 44 1.47 Binding ≤ 1μM
CAH5B_HUMAN Q9Y2D0 Carbonic Anhydrase VB, Human 540 1.25 Binding ≤ 1μM
CAH6_HUMAN P23280 Carbonic Anhydrase VI, Human 740 1.23 Binding ≤ 1μM
CAH7_HUMAN P43166 Carbonic Anhydrase VII, Human 420 1.28 Binding ≤ 1μM
CAH12_HUMAN O43570 Carbonic Anhydrase XII, Human 450 1.27 Binding ≤ 1μM
CAH13_MOUSE Q9D6N1 Carbonic Anhydrase XIII, Mouse 630 1.24 Binding ≤ 1μM
CAH14_HUMAN Q9ULX7 Carbonic Anhydrase XIV, Human 500 1.26 Binding ≤ 1μM
CAH15_MOUSE Q99N23 Carbonic Anhydrase 15, Mouse 650 1.24 Binding ≤ 10μM
CAH3_HUMAN P07451 Carbonic Anhydrase III, Human 500 1.26 Binding ≤ 10μM
CAH4_HUMAN P22748 Carbonic Anhydrase IV, Human 52 1.46 Binding ≤ 10μM
CAH9_HUMAN Q16790 Carbonic Anhydrase IX, Human 380 1.28 Binding ≤ 10μM
CAH5A_HUMAN P35218 Carbonic Anhydrase VA, Human 44 1.47 Binding ≤ 10μM
CAH5B_HUMAN Q9Y2D0 Carbonic Anhydrase VB, Human 540 1.25 Binding ≤ 10μM
CAH6_HUMAN P23280 Carbonic Anhydrase VI, Human 740 1.23 Binding ≤ 10μM
CAH7_HUMAN P43166 Carbonic Anhydrase VII, Human 420 1.28 Binding ≤ 10μM
CAH12_HUMAN O43570 Carbonic Anhydrase XII, Human 450 1.27 Binding ≤ 10μM
CAH13_MOUSE Q9D6N1 Carbonic Anhydrase XIII, Mouse 630 1.24 Binding ≤ 10μM
CAH14_HUMAN Q9ULX7 Carbonic Anhydrase XIV, Human 500 1.26 Binding ≤ 10μM

Reactome Annotations from Targets (via Uniprot)

Description Species
Erythrocytes take up carbon dioxide and release oxygen
Erythrocytes take up oxygen and release carbon dioxide
Regulation of gene expression by Hypoxia-inducible Factor
Reversible hydration of carbon dioxide

Analogs ( Draw Identity 99% 90% 80% 70% )

No pre-computed analogs available. Try a structural similarity search.