UCSF

ZINC00057163

Substance Information

In ZINC since Heavy atoms Benign functionality
October 3rd, 2005 14 Yes

Other Names:

"5-Methoxytryptamine, 98%"

1H-indole-3-ethanamine, 5-methoxy-

1H-indole-3-ethanamine, 5-methoxy-, monohydrochloride

2-(5-Methoxy-1H-indol-3-yl)-ethanamine hydrochloride

2-(5-Methoxy-1H-indol-3-yl)-ethylamine

2-(5-methoxy-1H-indol-3-yl)ethan-1-amine

2-(5-methoxy-1H-indol-3-yl)ethanamine

2-(5-methoxy-1H-indol-3-yl)ethanamine hydrochloride

2-(5-methoxy-1H-indol-3-yl)ethanamine; 2-(5-methoxyindol-3-yl)ethylamine; 3-(2-aminoethyl)-5-methoxyindole; 5-MT; 5-MeOT; 5-Methoxytryptamine; 5-methoxy-1H-indole-3-ethanamine; 5MOT; O-Methylserotonin hydrochloride; O-methylserotonin; bmse000626; mexamine

2-(5-Methoxy-1H-indol-3-yl)ethanamine;2-(5-Methoxyindol-3-yl)ethylamine;3-(2-Aminoethyl)-5-methoxyindole;5-Mot;5MOT;Lopac-M-6628;Meksamin;Methoxytryptamine;Mexamine;Mexamine base

2-(5-methoxyindol-3-yl)ethylamine; 3-(2-aminoethyl)-5-methoxyindole; 5-MT; 5-MeOT; 5-Methoxytryptamine; 5-methoxy-1H-indole-3-ethanamine; 5MOT; mexamine

2-[5-Methoxyindol-3-yl]ethylamine hydrochloride

3-(2-Aminoethyl)-5-Methoxyindole

3-(2-Aminoethyl)-5-methoxyindole hydrochloride

5-MeOT; 5-Methoxytryptamine; 608-07-1; C05659

5-Methoxytryptamine (5-MT)

5-Methoxytryptamine HCl

5-Methoxytryptamine hydrochloride

5-Methoxytryptamine hydrochloride, 97%

5-Methoxytryptamine hydrochloride, 98+%

5-Methoxytryptamine [608-07-1]

5-Methoxytryptamine, 97%

5-Methoxytryptamine, free base

5-methoxytryptamine; CPD-12018; O-methylserotonin; methoxytryptamine; mexamine

5-Methoxytryptamine; CPD000112269; SAM001246909

5-METHOXYTRYPTAMINE; [608-07-1]

BRD-K30197592-001-01-5

CPD000112269; 5-Methoxytryptamine

DNC004868

LS-83060

METHOXYINDOLYLETHANAMIN

METHOXYINDOLYLETHANAMINEHYDROCHLORID

Mexamine

MFCD00005662

MFCD00012684

n / a

NA

O-Methylserotonin

O-Methylserotonin hydrochloride

OR-1160

Uncharged structure must be alone

[2-(5-methoxy-1H-indol-3-yl)ethyl]amine hydrochloride

Download: MOL2 SDF SMILES Flexibase

Annotations

Vendors

Physical Representations

Type pH range xlogP Des A‑Pol Apolar desolvation (kcal/mol) Des Pol Polar desolvation (kcal/mol) H Don H-bond donors H Acc H-bond acceptors Chg Net charge tPSA (Ų) MWT Molecular weight (g/mol) RB Rotatable bonds DL
Ref Reference (pH 7) 1.10 2.65 -46.13 4 3 1 53 191.254 3

Vendor Notes

Note Type Comments Provided By
MP 119 - 121 Enamine Building Blocks
MP 119...121 Enamine Building Blocks
MP 121 TCI
MP 121 - 123 Enamine Building Blocks
MP 121-123 ºC Matrix Scientific
MP 245-250 °C (dec.)(lit.) Indofine
Melting_Point 245-250? dec. Alfa-Aesar
MP 245-250° Matrix Scientific
Melting_Point 245-250° dec. Alfa-Aesar
MP 245-250°(dec.) Oakwood Chemical
Mp [°C] 246 - 248 Acros Organics
Therapy 5HT agonist SMDC MicroSource
purity 9.500000000000000e+001 Enamine Building Blocks Enamine Building Blocks
Purity 95% Fluorochem
Purity 95+% Matrix Scientific
Purity 97% Fluorochem
Purity 98% Matrix Scientific
Hazard C: Corrosive Acros Organics
Patent Database Links EP1666040; WO2005039546 ChEBI
H phrase H302: Harmful if swallowed Acros Organics
H phrase H314: Causes severe skin burns and eye damage; H318: Causes serious eye damage; H302: Harmful if swallowed Acros Organics
Warnings IRRITANT Matrix Scientific
PUBCHEM_SUBSTANCE_COMMENT NCC_SAMPLE_SUPPLIER : Sigma Chemical Company; NCC_SUPPLIER_STRUCTURE_ID : 286583 NIH Clinical Collection via PubChem
P phrase P301 + P330 + P331: IF SWALLOWED: rinse mouth. Do NOT induce vomiting; P280: Wear eye protection/face protection; P305 + P351 + P338: IF IN EYES: Rinse cautiously with water for several minutes. Remove contact lenses, if present and easy to do. Continue r Acros Organics
P phrase P301+ P312: IF SWALLOWED: Call a POISON CENTER or doctor/physician if you feel unwell Acros Organics
R phrase R22: Harmful if swallowed. Acros Organics
R phrase R22: Harmful if swallowed.; R34: Causes burns. Acros Organics
S phrase S26: In case of contact with eyes, rinse immediately with plenty of water and seek medical advice.; S36/37/39: Wear suitable protective clothing, gloves and eye/face protection.; S45: In case of accident or if you feel unwell, seek medical advice immediat Acros Organics
PUBCHEM_SUBSTANCE_COMMENT SAMPLE_SUPPLIER: Sigma Chemical Company; SUPPLIER_STRUCTURE_ID: 286583 NIH Clinical Collection via PubChem
Hazard XN: Harmful Acros Organics

Activity (Go SEA)

Clustered Target Annotations
Code Description Organism Class Affinity (nM) LE (kcal/mol/atom) Type
5HT1A-3-E Serotonin 1a (5-HT1a) Receptor (cluster #3 Of 4), Eukaryotic Eukaryotes 9 0.80 Binding ≤ 10μM
5HT1B-1-E Serotonin 1b (5-HT1b) Receptor (cluster #1 Of 2), Eukaryotic Eukaryotes 400 0.64 Binding ≤ 10μM
5HT1D-1-E Serotonin 1d (5-HT1d) Receptor (cluster #1 Of 2), Eukaryotic Eukaryotes 2 0.87 Binding ≤ 10μM
5HT1F-1-E Serotonin 1f (5-HT1f) Receptor (cluster #1 Of 2), Eukaryotic Eukaryotes 2 0.87 Binding ≤ 10μM
5HT2A-2-E Serotonin 2a (5-HT2a) Receptor (cluster #2 Of 3), Eukaryotic Eukaryotes 5 0.83 Binding ≤ 10μM
5HT2B-1-E Serotonin 2b (5-HT2b) Receptor (cluster #1 Of 4), Eukaryotic Eukaryotes 690 0.62 Binding ≤ 10μM
5HT2C-1-E Serotonin 2c (5-HT2c) Receptor (cluster #1 Of 3), Eukaryotic Eukaryotes 45 0.73 Binding ≤ 10μM
5HT4R-1-E Serotonin 4 (5-HT4) Receptor (cluster #1 Of 1), Eukaryotic Eukaryotes 27 0.76 Binding ≤ 10μM
5HT6R-1-E Serotonin 6 (5-HT6) Receptor (cluster #1 Of 2), Eukaryotic Eukaryotes 88 0.71 Binding ≤ 10μM
5HT7R-2-E Serotonin 7 (5-HT7) Receptor (cluster #2 Of 3), Eukaryotic Eukaryotes 2 0.87 Binding ≤ 10μM
ChEMBL Target Annotations
Uniprot Swissprot Description Affinity (nM) LE (kcal/mol/atom) Type
5HT1A_RAT P19327 Serotonin 1a (5-HT1a) Receptor, Rat 2 0.87 Binding ≤ 1μM
5HT1A_HUMAN P08908 Serotonin 1a (5-HT1a) Receptor, Human 3.2 0.85 Binding ≤ 1μM
5HT1B_RAT P28564 Serotonin 1b (5-HT1b) Receptor, Rat 2 0.87 Binding ≤ 1μM
5HT1B_HUMAN P28222 Serotonin 1b (5-HT1b) Receptor, Human 3.5 0.85 Binding ≤ 1μM
5HT1D_RAT P28565 Serotonin 1d (5-HT1d) Receptor, Rat 2 0.87 Binding ≤ 1μM
5HT1D_HUMAN P28221 Serotonin 1d (5-HT1d) Receptor, Human 4.1 0.84 Binding ≤ 1μM
5HT1F_RAT P30940 Serotonin 1f (5-HT1f) Receptor, Rat 2 0.87 Binding ≤ 1μM
5HT2A_RAT P14842 Serotonin 2a (5-HT2a) Receptor, Rat 14 0.79 Binding ≤ 1μM
5HT2A_HUMAN P28223 Serotonin 2a (5-HT2a) Receptor, Human 300 0.65 Binding ≤ 1μM
5HT2B_RAT P30994 Serotonin 2b (5-HT2b) Receptor, Rat 14 0.79 Binding ≤ 1μM
5HT2C_RAT P08909 Serotonin 2c (5-HT2c) Receptor, Rat 14 0.79 Binding ≤ 1μM
5HT2C_HUMAN P28335 Serotonin 2c (5-HT2c) Receptor, Human 45 0.73 Binding ≤ 1μM
5HT4R_HUMAN Q13639 Serotonin 4 (5-HT4) Receptor, Human 245.470892 0.66 Binding ≤ 1μM
5HT6R_HUMAN P50406 Serotonin 6 (5-HT6) Receptor, Human 50 0.73 Binding ≤ 1μM
5HT7R_HUMAN P34969 Serotonin 7 (5-HT7) Receptor, Human 2 0.87 Binding ≤ 1μM
5HT1A_RAT P19327 Serotonin 1a (5-HT1a) Receptor, Rat 2 0.87 Binding ≤ 10μM
5HT1A_HUMAN P08908 Serotonin 1a (5-HT1a) Receptor, Human 3.2 0.85 Binding ≤ 10μM
5HT1B_RAT P28564 Serotonin 1b (5-HT1b) Receptor, Rat 2 0.87 Binding ≤ 10μM
5HT1B_HUMAN P28222 Serotonin 1b (5-HT1b) Receptor, Human 3.5 0.85 Binding ≤ 10μM
5HT1D_HUMAN P28221 Serotonin 1d (5-HT1d) Receptor, Human 4.1 0.84 Binding ≤ 10μM
5HT1D_RAT P28565 Serotonin 1d (5-HT1d) Receptor, Rat 2 0.87 Binding ≤ 10μM
5HT1F_RAT P30940 Serotonin 1f (5-HT1f) Receptor, Rat 2 0.87 Binding ≤ 10μM
5HT2A_HUMAN P28223 Serotonin 2a (5-HT2a) Receptor, Human 300 0.65 Binding ≤ 10μM
5HT2A_RAT P14842 Serotonin 2a (5-HT2a) Receptor, Rat 14 0.79 Binding ≤ 10μM
5HT2B_RAT P30994 Serotonin 2b (5-HT2b) Receptor, Rat 14 0.79 Binding ≤ 10μM
5HT2C_HUMAN P28335 Serotonin 2c (5-HT2c) Receptor, Human 45 0.73 Binding ≤ 10μM
5HT2C_RAT P08909 Serotonin 2c (5-HT2c) Receptor, Rat 14 0.79 Binding ≤ 10μM
5HT4R_HUMAN Q13639 Serotonin 4 (5-HT4) Receptor, Human 245.470892 0.66 Binding ≤ 10μM
5HT6R_HUMAN P50406 Serotonin 6 (5-HT6) Receptor, Human 50 0.73 Binding ≤ 10μM
5HT7R_HUMAN P34969 Serotonin 7 (5-HT7) Receptor, Human 2 0.87 Binding ≤ 10μM

Reactome Annotations from Targets (via Uniprot)

Description Species
G alpha (i) signalling events
G alpha (q) signalling events
G alpha (s) signalling events
Serotonin receptors

Analogs ( Draw Identity 99% 90% 80% 70% )