UCSF

ZINC04474696

Substance Information

In ZINC since Heavy atoms Benign functionality
December 3rd, 2005 22 Yes

CAS Numbers: 506-32-1 , 69254-37-1

Other Names:

"Arachidonic acid, 99% [from porcine liver]"

(5Z,8Z,11Z,14Z)-5,8,11,14-icosatetraenoic acid; AA; ARA; Arachidonsaeure; all-cis-5,8,11,14-eicosatetraenoic acid; cis-Delta(5,8,11,14)-eicosatetraenoic acid

(5Z,8Z,11Z,14Z)-Icosa-5,8,11,14-tetraenoic acid

(5Z,8Z,11Z,14Z)-Icosatetraenoic acid; 506-32-1; Arachidonate; Arachidonic acid; C00219; cis-5,8,11,14-Eicosatetraenoic acid

(all-Z)-5,8,11,14-Eicosatetraenoate; (all-Z)-5,8,11,14-Eicosatetraenoic acid; 5,8,11,14-All-cis-Eicosatetraenoate; 5,8,11,14-All-cis-Eicosatetraenoic acid; 5,8,11,14-Eicosatetraenoate; 5,8,11,14-Eicosatetraenoic acid; 5-cis,8-cis,11-cis,14-cis-Eicosatetra

(all-Z)-5,8,11,14-Eicosatetraenoate;(all-Z)-5,8,11,14-Eicosatetraenoic acid;5,8,11,14-All-cis-Eicosatetraenoate;5,8,11,14-All-cis-Eicosatetraenoic acid;5,8,11,14-Eicosatetraenoate;5,8,11,14-Eicosatetraenoic acid;5-cis,8-cis,11-cis,14-cis-Eicosatetraenoate

(all-Z)-icosa-5,8,11,14-tetraenoate; 5,8,11,14-icosatetraenoate; 506-32-1; ARACHIDONIC_ACID; arachidonate; arachidonic acid

5,8,11,14-Eicosatetraenoic acid, sodium salt, (all-Z)-; Arachidonic acid sodium salt; LS-63799; Sodium arachidonate

5Z,8Z,11Z,14Z-eicosatetraenoic acid

5Z,8Z,11Z,14Z-icosatetraenoic acid; AA; Arachidonate; cis-5,8,11,14-Eicosatetraenoic acid; (all-Z)-5,8,11,14-Eicosatetraenoic acid; all-cis-5,8,11,14-Eicosatetraenoic acid

ARACHIDONIC ACID (5c,8c,11c,14c)

Arachidonic Acid (peroxide free)

ARACHIDONIC ACID biotin

Arachidonic acid-d8

Arachidonic-5,6,8,9,11,12,14,15-D8 Acid

ARACHIDONIC-5,6,8,9,11,12,14,15-D8 ACID ; [69254-37-1]

ArachidonicAcid

BRD-K03070961-001-02-8

CHEBI:40501; CHEBI:22608; CHEBI:2799

DNC000249

MFCD00004417

MFCD00065888

Omega-3-Methyl Arachidonate (8c,11c,14c,17c)

omega-3-METHYL ARACHIDONATE (8c,11c,14c,17c); [132712-70-0]

Download: MOL2 SDF SMILES Flexibase

Annotations

Vendors

Physical Representations

Type pH range xlogP Des A‑Pol Apolar desolvation (kcal/mol) Des Pol Polar desolvation (kcal/mol) H Don H-bond donors H Acc H-bond acceptors Chg Net charge tPSA (Ų) MWT Molecular weight (g/mol) RB Rotatable bonds DL
Ref Reference (pH 7) 6.42 14.92 -43.78 0 2 -1 40 303.466 14
Lo Low (pH 4.5-6) 6.42 12.94 -5.78 1 2 0 37 304.474 14

Vendor Notes

Note Type Comments Provided By
M.P 49 °C Indofine
Purity >90% Fluorochem
Purity >98% Fluorochem
UniProt Database Links ACSL1_MOUSE; ACSL1_RAT; ACSL3_HUMAN; ACSL3_MOUSE; ACSL3_PONAB; ACSL3_RAT; ACSL4_HUMAN; ACSL4_MOUSE; ACSL4_RAT; AL5AP_BOVIN; AL5AP_HORSE; AL5AP_HUMAN; AL5AP_MACFA; AL5AP_MACMU; AL5AP_MOUSE; AL5AP_PIG; AL5AP_RABIT; AL5AP_RAT; AL5AP_SHEEP; ALL11_ARAHY; ALL12 ChEBI
APPEARANCE colorless to light yellow Indofine
Patent Database Links EP0839806; EP0947523; EP0950657; EP0950661; EP0976748; EP1020179; EP1156050; EP1277743; EP1410822; EP1435353; EP1506996; EP1557427; EP1604675; EP1629850; EP1634599; EP1642983; EP1656839; EP1666092; EP1676488; EP1679068; EP1707198; EP1714564; EP1726217; EP ChEBI
PUBCHEM_PATENT_ID EP0951283A1; US5753702; US6140364 IBM Patent Data
SOLUBILITY ethanol: =10 mg/mL Indofine
Therapy prostaglanin & leucotriene precursor, stimulates NO biosynthesis SMDC MicroSource
Reactome Database Links REACT_13412; REACT_13485; REACT_13525; REACT_13615; REACT_147758; REACT_150129; REACT_150130; REACT_150190; REACT_150225; REACT_150226; REACT_150287; REACT_150327; REACT_150372; REACT_150406; REACT_150433; REACT_150441; REACT_150442; REACT_15331; REACT_15 ChEBI
Target Voltage-dependent L-type calcium channel subunit alpha-1C(Q13936)&Caspase-3(P42574)&Collagen alpha-2(I) chain(P08123)&Vascular cell adhesion protein 1(P19320)&Phospholipid scramblase 1(O15162)&Integrin alpha-M(P11215)&T-lymphocyte activation antigen CD86( Herbal Ingredients Targets

Activity (Go SEA)

Clustered Target Annotations
Code Description Organism Class Affinity (nM) LE (kcal/mol/atom) Type
FABP4-2-E Fatty Acid Binding Protein Adipocyte (cluster #2 Of 3), Eukaryotic Eukaryotes 180 0.43 Binding ≤ 10μM
Z50587-5-O Homo Sapiens (cluster #5 Of 9), Other Other 940 0.38 Functional ≤ 10μM
Z50643-1-O Hepatitis C Virus (cluster #1 Of 5), Other Other 10000 0.32 Functional ≤ 10μM
Z80548-2-O THP-1 (Acute Monocytic Leukemia Cells) (cluster #2 Of 5), Other Other 5 0.53 Functional ≤ 10μM
ChEMBL Target Annotations
Uniprot Swissprot Description Affinity (nM) LE (kcal/mol/atom) Type
FABP4_HUMAN P15090 Fatty Acid Binding Protein Adipocyte, Human 180 0.43 Binding ≤ 1μM
FABP4_HUMAN P15090 Fatty Acid Binding Protein Adipocyte, Human 180 0.43 Binding ≤ 10μM
Z50643 Z50643 Hepatitis C Virus 10000 0.32 Functional ≤ 10μM
Z50587 Z50587 Homo Sapiens 940 0.38 Functional ≤ 10μM
Z80548 Z80548 THP-1 (Acute Monocytic Leukemia Cells) 180 0.43 Functional ≤ 10μM

Direct Reactome Annotations (via ChEBI)

Description Species
Activation of gene expression by SREBF (SREBP)
Arachidonate production from DAG
Arachidonic acid metabolism
BMAL1:CLOCK,NPAS2 activates circadian gene expression
Circadian Clock
COX reactions
Fatty acids
Miscellaneous substrates
phospho-PLA2 pathway
PPARA activates gene expression
Regulation of lipid metabolism by Peroxisome proliferator-activated receptor alp
REV-ERBA represses gene expression
Role of phospholipids in phagocytosis
RORA activates circadian gene expression
Synthesis of (16-20)-hydroxyeicosatetraenoic acids (HETE)
Synthesis of 12-eicosatetraenoic acid derivatives
Synthesis of 15-eicosatetraenoic acid derivatives
Synthesis of 5-eicosatetraenoic acids
Synthesis of epoxy (EET) and dihydroxyeicosatrienoic acids (DHET)
Synthesis of Hepoxilins (HX) and Trioxilins (TrX)
Synthesis of Leukotrienes (LT) and Eoxins (EX)
Synthesis of Prostaglandins (PG) and Thromboxanes (TX)
Synthesis of very long-chain fatty acyl-CoAs
Transcriptional activation of mitochondrial biogenesis
Transcriptional regulation of white adipocyte differentiation
YAP1- and WWTR1 (TAZ)-stimulated gene expression

Reactome Annotations from Targets (via Uniprot)

Description Species
Hormone-sensitive lipase (HSL)-mediated triacylglycerol hydrolysis
Transcriptional regulation of white adipocyte differentiation

Analogs ( Draw Identity 99% 90% 80% 70% )