In ZINC since | Heavy atoms | Benign functionality |
---|---|---|
September 26th, 2005 | 17 | Yes |
Popular Name: Cytarabine Cytarabine
"Cytosine ¦Â-D-arabinofuranoside, 98%"
(1'R,2'S,3'R,4'R)-4-amino-1-[3,4-dihydroxy-5-(hydroxymethyl)tetrahydrofuran-2-yl]pyrimidin-2(1H)-one
(beta-D-Arabinofuranosyl)cytosine
1-.beta.-D-arabinofuranosyl-cytosine
1-beta-D-Arabinofaranosylcytosine
1-beta-D-Arabinofuranosyl-4-amino-2(1H)pyrimidinone
1-beta-D-Arabinofuranosylcytosine
1-beta-D-Arabinofuranosylcytosine, Cytosine Arabinoside
147-94-4; ARA-C; Cytarabine (JP16/USP/INN); D00168; Depocyt (TN)
147-94-4; C02961; Cytarabine; Cytosine arabinoside; Cytosine-1-beta-D-arabinofuranoside
1beta-Arabinofuranasylcytosine
1beta-D-Arabinofuranosylcytosine
2(1H)-Pyrimidinone, 4-amino-1- -D-arabinofuranosyl- [CAS]
2(1H)-Pyrimidinone, 4-amino-1- -D-arabinofuranosyl- [CAS]; CPD000449317; SAM001247012
2(1H)-Pyrimidinone, 4-amino-1-.beta.-D-arabinofuranosyl-
2(1H)-Pyrimidinone, 4-amino-1-beta-D-arabinofuranosyl-
2(1H)-Pyrimidinone, 4-amino-1-y-D-arabinofuranosyl- [CAS]; CPD000449317; SAM001247012; cytarabine
2(1H)-Pyrimidinone, 4-amino-1-¦Â-D-arabinofuranosyl-
4-Amino-1-((2R,3S,4S,5R)-3,4-dihydroxy-5-(hydroxymethyl)tetrahydrofuran-2-yl)pyrimidin-2(1H)-one
4-Amino-1-(beta-D-arabinofuranosyl)-2(1H)-pyrimidinone hydrochloride
4-Amino-1-arabinofuranosyl-2-oxo-1,2-dihydropyrimidin
4-Amino-1-arabinofuranosyl-2-oxo-1,2-dihydropyrimidin [Czech]
4-Amino-1-arabinofuranosyl-2-oxo-1,2-dihydropyrimidine
4-Amino-1-b-D-arabinofuranosyl-2-(1H)-pyrimidinone
4-Amino-1-beta-D-arabinofuranosyl-2(1H)-pyrimidinon
4-Amino-1-beta-D-arabinofuranosyl-2(1H)-pyrimidinon [Czech]
4-Amino-1-beta-D-arabinofuranosyl-2(1H)-pyrimidinone
4-amino-1-beta-D-arabinofuranosylpyrimidin-2(1H)-one
4-amino-1-[(2R,3S,4S,5R)-3,4-dihydroxy-5-(hydroxymethyl)oxolan-2-yl]pyrimidin-2-one
69-74-9; Cytarabine hydrochloride (USAN); D03637
Ara-C, Cytosine Arabinoside, Cytosar-U, Cytarabine
CHEBI:40824; CHEBI:23532; CHEBI:4074
CPD000449317; 2(1H)-Pyrimidinone, 4-amino-1-ÿ-D-arabinofuranosyl- [CAS]; 147-94-4
CYTARABINE (SEE ALSO CYTARABINE HYDROCHLORIDE 69-74-9)
Cytosine 1-beta-D-arabinofuranoside
Cytosine â-D-arabinofuranoside
Cytosine arabinoside hydrochloride
Cytosine beta-D-arabinofuranoside
CYTOSINE BETA-D-ARABINOFURANOSIDE HYDROCHLORIDE
Cytosine beta-D-arabinofuranoside hydrochloride, 99%, crystalline
Cytosine beta-D-arabinofuranoside, 98%
Cytosine, 1-beta-D-arabinofuranosyl-
Cytosine, 1-beta-D-arabinosyl-
Cytosine-1-beta-D-arabinofuranoside
Cytosine-beta-D-arabinofuranoside
Intrathecal (injected into the spinal fluid) DepoCyt
Intrathecal cytarabine (also known as ara-C)
Type pH range | xlogP | Des A‑Pol Apolar desolvation (kcal/mol) | Des Pol Polar desolvation (kcal/mol) | H Don H-bond donors | H Acc H-bond acceptors | Chg Net charge | tPSA (Ų) | MWT Molecular weight (g/mol) | RB Rotatable bonds | DL |
---|---|---|---|---|---|---|---|---|---|---|
Ref Reference (pH 7) | -1.93 | -7.17 | -24.49 | 5 | 8 | 0 | 131 | 243.219 | 2 | ↓ |
Note Type | Comments | Provided By |
---|---|---|
Mp [°C] | 197 - 198 | Acros Organics |
MP | 214 | TCI |
ALOGPS_SOLUBILITY | 4.38e+01 g/l | DrugBank-approved |
Purity | 95% | Fluorochem |
Purity | 97% | APIChem |
Indications | antineoplastic, antiviral | KeyOrganics Bioactives |
Therapy | antineoplastic, antiviral, antimetabolite | SMDC Pharmakon |
Melting_Point | ca 215? dec. | Alfa-Aesar |
Melting_Point | ca 215° dec. | Alfa-Aesar |
UniProt Database Links | DCK_HUMAN; KPCD1_HUMAN; KPCD1_MOUSE; KPCD1_RAT; MKNK2_HUMAN | ChEBI |
PUBCHEM_PATENT_ID | EP0339075A1; EP0339075B1; EP0360626A1; EP0934331A2; US4963469; US5190926; US5470838; US5583117; US5677441; US5747319; US5756704; US5916556; WO1989003837A1; WO1998004714A1; WO1998006877A2; WO1998008856A2 | IBM Patent Data |
Patent Database Links | EP0819433; EP1498127; EP1535624; EP1537858; EP1538164; EP1552841; EP1568379; EP1574499; EP1580188; EP1584686; EP1611879; EP1676576; EP1710256; EP1717247; EP1719527; EP1728863; EP1738759; EP1746099; EP1772452; EP1803810; EP1813609; EP1834637; EP1849480; EP | ChEBI |
H phrase | H317: May cause an allergic skin reaction | Acros Organics |
H phrase | H317: May cause an allergic skin reaction; H319: Causes serious eye irritation; H361d: Suspected of damaging the unborn child | Acros Organics |
Indications | leukaemia, antiviral | KeyOrganics Bioactives |
PUBCHEM_SUBSTANCE_COMMENT | NCC_SAMPLE_SUPPLIER : Tocris Cookson Ltd.; NCC_SUPPLIER_STRUCTURE_ID : 101401 | NIH Clinical Collection via PubChem |
Target | Others | Selleck Chemicals |
P phrase | P201: Obtain special instructions before use; P280: Wear protective gloves/protective clothing/eye protection/face protection; P305 + P351 + P338: IF IN EYES: Rinse cautiously with water for several minutes. Remove contact lenses, if present and easy to d | Acros Organics |
P phrase | P280: Wear eye protection/face protection | Acros Organics |
P phrase | P280: Wear eye protection/face protection; P281: Use personal protective equipment as required; P280: Wear protective gloves/protective clothing/eye protection/face protection; P305 + P351 + P338: IF IN EYES: Rinse cautiously with water for several minute | Acros Organics |
R phrase | R36: Irritating to eyes. | Acros Organics |
R phrase | R36: Irritating to eyes.; R43: May cause sensitisation by skin contact.; R63: Possible risk of harm to the unborn child. | Acros Organics |
S phrase | S26: In case of contact with eyes, rinse immediately with plenty of water and seek medical advice. | Acros Organics |
S phrase | S26: In case of contact with eyes, rinse immediately with plenty of water and seek medical advice.; S36/37/39: Wear suitable protective clothing, gloves and eye/face protection. | Acros Organics |
PUBCHEM_SUBSTANCE_COMMENT | SAMPLE_SUPPLIER: Tocris Bioscience; SUPPLIER_STRUCTURE_ID: 101401 | NIH Clinical Collection via PubChem |
Hazard | XN: Harmful | Acros Organics |
Code | Description | Organism Class | Affinity (nM) | LE (kcal/mol/atom) | Type |
---|---|---|---|---|---|
Z50515-1-O | Human Herpesvirus 2 (cluster #1 Of 2), Other | Other | 2000 | 0.47 | Functional ≤ 10μM |
Z50602-2-O | Human Herpesvirus 1 (cluster #2 Of 5), Other | Other | 300 | 0.54 | Functional ≤ 10μM |
Z50643-2-O | Hepatitis C Virus (cluster #2 Of 5), Other | Other | 20 | 0.63 | Functional ≤ 10μM |
Z80064-1-O | CCRF-CEM (T-cell Leukemia) (cluster #1 Of 9), Other | Other | 90 | 0.58 | Functional ≤ 10μM |
Z80067-1-O | CCRF-HSB-2 (T-cell Leukemia Cells) (cluster #1 Of 1), Other | Other | 150 | 0.56 | Functional ≤ 10μM |
Z80100-1-O | COLO 320 (Colon Adenocarcinoma Cells) (cluster #1 Of 2), Other | Other | 40 | 0.61 | Functional ≤ 10μM |
Z80156-2-O | HL-60 (Promyeloblast Leukemia Cells) (cluster #2 Of 12), Other | Other | 8000 | 0.42 | Functional ≤ 10μM |
Z80164-1-O | HT-1080 (Fibrosarcoma Cells) (cluster #1 Of 6), Other | Other | 530 | 0.52 | Functional ≤ 10μM |
Z80166-1-O | HT-29 (Colon Adenocarcinoma Cells) (cluster #1 Of 12), Other | Other | 66 | 0.59 | Functional ≤ 10μM |
Z80186-1-O | K562 (Erythroleukemia Cells) (cluster #1 Of 11), Other | Other | 500 | 0.52 | Functional ≤ 10μM |
Z80193-2-O | L1210 (Lymphocytic Leukemia Cells) (cluster #2 Of 12), Other | Other | 50 | 0.60 | Functional ≤ 10μM |
Z80193-2-O | L1210 (Lymphocytic Leukemia Cells) (cluster #2 Of 12), Other | Other | 100 | 0.58 | Functional ≤ 10μM |
Z80224-9-O | MCF7 (Breast Carcinoma Cells) (cluster #9 Of 14), Other | Other | 620 | 0.51 | Functional ≤ 10μM |
Z80285-1-O | MOLT-4 (Acute T-lymphoblastic Leukemia Cells) (cluster #1 Of 4), Other | Other | 10 | 0.66 | Functional ≤ 10μM |
Z80362-6-O | P388 (Lymphoma Cells) (cluster #6 Of 8), Other | Other | 140 | 0.56 | Functional ≤ 10μM |
Z80429-1-O | RPMI 6410 (cluster #1 Of 1), Other | Other | 60 | 0.59 | Functional ≤ 10μM |
Z80466-1-O | SF268 (cluster #1 Of 4), Other | Other | 7680 | 0.42 | Functional ≤ 10μM |
Z80485-1-O | SK-MEL-28 (Melanoma Cells) (cluster #1 Of 6), Other | Other | 1000 | 0.49 | Functional ≤ 10μM |
Z80500-1-O | SNB-7 (cluster #1 Of 1), Other | Other | 1000 | 0.49 | Functional ≤ 10μM |
Z80678-1-O | AMML Cell Line (cluster #1 Of 1), Other | Other | 2300 | 0.46 | Functional ≤ 10μM |
Z80682-1-O | A549 (Lung Carcinoma Cells) (cluster #1 Of 11), Other | Other | 1900 | 0.47 | Functional ≤ 10μM |
Z80712-2-O | T47D (Breast Carcinoma Cells) (cluster #2 Of 7), Other | Other | 2700 | 0.46 | Functional ≤ 10μM |
Z80777-1-O | CML/BC Cell Line (cluster #1 Of 1), Other | Other | 210 | 0.55 | Functional ≤ 10μM |
Z80874-1-O | CEM (T-cell Leukemia) (cluster #1 Of 7), Other | Other | 24 | 0.63 | Functional ≤ 10μM |
Z80928-1-O | HCT-116 (Colon Carcinoma Cells) (cluster #1 Of 9), Other | Other | 5300 | 0.43 | Functional ≤ 10μM |
Z81020-1-O | HepG2 (Hepatoblastoma Cells) (cluster #1 Of 8), Other | Other | 200 | 0.55 | Functional ≤ 10μM |
Z81077-1-O | KATO III Cell Line (cluster #1 Of 1), Other | Other | 300 | 0.54 | Functional ≤ 10μM |
Z81115-2-O | KB (Squamous Cell Carcinoma) (cluster #2 Of 6), Other | Other | 700 | 0.51 | Functional ≤ 10μM |
Z81166-1-O | LLC Cell Line (cluster #1 Of 1), Other | Other | 5600 | 0.43 | Functional ≤ 10μM |
Z81192-1-O | PC-8 (cluster #1 Of 1), Other | Other | 1100 | 0.49 | Functional ≤ 10μM |
Z81193-1-O | PC-9 (cluster #1 Of 1), Other | Other | 6600 | 0.43 | Functional ≤ 10μM |
Z81247-1-O | HeLa (Cervical Adenocarcinoma Cells) (cluster #1 Of 9), Other | Other | 260 | 0.54 | Functional ≤ 10μM |
Z81281-1-O | NCI-H23 (Non-small Cell Lung Carcinoma Cells) (cluster #1 Of 5), Other | Other | 1000 | 0.49 | Functional ≤ 10μM |
Uniprot | Swissprot | Description | Affinity (nM) | LE (kcal/mol/atom) | Type |
---|---|---|---|---|---|
Z80682 | Z80682 | A549 (Lung Carcinoma Cells) | 1900 | 0.47 | Functional ≤ 10μM |
Z80678 | Z80678 | AMML Cell Line | 2300 | 0.46 | Functional ≤ 10μM |
Z80064 | Z80064 | CCRF-CEM (T-cell Leukemia) | 20 | 0.63 | Functional ≤ 10μM |
Z80067 | Z80067 | CCRF-HSB-2 (T-cell Leukemia Cells) | 150 | 0.56 | Functional ≤ 10μM |
Z80874 | Z80874 | CEM (T-cell Leukemia) | 24 | 0.63 | Functional ≤ 10μM |
Z80777 | Z80777 | CML/BC Cell Line | 210 | 0.55 | Functional ≤ 10μM |
Z80100 | Z80100 | COLO 320 (Colon Adenocarcinoma Cells) | 40 | 0.61 | Functional ≤ 10μM |
Z80928 | Z80928 | HCT-116 (Colon Carcinoma Cells) | 100 | 0.58 | Functional ≤ 10μM |
Z81247 | Z81247 | HeLa (Cervical Adenocarcinoma Cells) | 260 | 0.54 | Functional ≤ 10μM |
Z50643 | Z50643 | Hepatitis C Virus | 20 | 0.63 | Functional ≤ 10μM |
Z81020 | Z81020 | HepG2 (Hepatoblastoma Cells) | 200 | 0.55 | Functional ≤ 10μM |
Z80156 | Z80156 | HL-60 (Promyeloblast Leukemia Cells) | 130 | 0.57 | Functional ≤ 10μM |
Z80164 | Z80164 | HT-1080 (Fibrosarcoma Cells) | 530 | 0.52 | Functional ≤ 10μM |
Z80166 | Z80166 | HT-29 (Colon Adenocarcinoma Cells) | 66 | 0.59 | Functional ≤ 10μM |
Z50602 | Z50602 | Human Herpesvirus 1 | 300 | 0.54 | Functional ≤ 10μM |
Z50515 | Z50515 | Human Herpesvirus 2 | 2000 | 0.47 | Functional ≤ 10μM |
Z80186 | Z80186 | K562 (Erythroleukemia Cells) | 50 | 0.60 | Functional ≤ 10μM |
Z81077 | Z81077 | KATO III Cell Line | 300 | 0.54 | Functional ≤ 10μM |
Z81115 | Z81115 | KB (Squamous Cell Carcinoma) | 640 | 0.51 | Functional ≤ 10μM |
Z80193 | Z80193 | L1210 (Lymphocytic Leukemia Cells) | 10 | 0.66 | Functional ≤ 10μM |
Z81166 | Z81166 | LLC Cell Line | 5600 | 0.43 | Functional ≤ 10μM |
Z80224 | Z80224 | MCF7 (Breast Carcinoma Cells) | 1030 | 0.49 | Functional ≤ 10μM |
Z80285 | Z80285 | MOLT-4 (Acute T-lymphoblastic Leukemia Cells) | 10 | 0.66 | Functional ≤ 10μM |
Z81281 | Z81281 | NCI-H23 (Non-small Cell Lung Carcinoma Cells) | 1000 | 0.49 | Functional ≤ 10μM |
Z80362 | Z80362 | P388 (Lymphoma Cells) | 1233 | 0.49 | Functional ≤ 10μM |
Z81192 | Z81192 | PC-8 | 1100 | 0.49 | Functional ≤ 10μM |
Z81193 | Z81193 | PC-9 | 6600 | 0.43 | Functional ≤ 10μM |
Z80429 | Z80429 | RPMI 6410 | 60 | 0.59 | Functional ≤ 10μM |
Z80466 | Z80466 | SF268 | 7.68 | 0.67 | Functional ≤ 10μM |
Z80485 | Z80485 | SK-MEL-28 (Melanoma Cells) | 1000 | 0.49 | Functional ≤ 10μM |
Z80500 | Z80500 | SNB-7 | 1000 | 0.49 | Functional ≤ 10μM |
Z80712 | Z80712 | T47D (Breast Carcinoma Cells) | 2700 | 0.46 | Functional ≤ 10μM |