| In ZINC since | Heavy atoms | Benign functionality |
|---|---|---|
| June 25th, 2008 | 28 | No |
Popular Name: [(2S,3R,5S)-5-(4-amino-2-oxo-pyrimidin-1-yl)-3-fluoro-tetrahydrofuran-2-yl]methyl [(2S,3R,5S)-5-(4-amino-2-oxo-pyr…
| Type pH range | xlogP | Des A‑Pol Apolar desolvation (kcal/mol) | Des Pol Polar desolvation (kcal/mol) | H Don H-bond donors | H Acc H-bond acceptors | Chg Net charge | tPSA (Ų) | MWT Molecular weight (g/mol) | RB Rotatable bonds | DL |
|---|---|---|---|---|---|---|---|---|---|---|
| Ref Reference (pH 7) | -3.72 | -0.72 | -354.23 | 2 | 15 | -4 | 241 | 465.116 | 8 | ↓ |
| Mid Mid (pH 6-8) | -3.72 | -1.88 | -219.54 | 3 | 15 | -3 | 238 | 466.124 | 8 | ↓ |
| Code | Description | Organism Class | Affinity (nM) | LE (kcal/mol/atom) | Type |
|---|---|---|---|---|---|
| DPOG1-1-E | DNA Polymerase Gamma Subunit 1 (cluster #1 Of 1), Eukaryotic | Eukaryotes | 2000 | 0.28 | Binding ≤ 10μM |
| DPOLA-1-E | DNA Polymerase Alpha Subunit (cluster #1 Of 2), Eukaryotic | Eukaryotes | 800 | 0.30 | Binding ≤ 10μM |
| DPOLB-1-E | DNA Polymerase Beta (cluster #1 Of 3), Eukaryotic | Eukaryotes | 1000 | 0.30 | Binding ≤ 10μM |
| Q72547-1-V | Human Immunodeficiency Virus Type 1 Reverse Transcriptase (cluster #1 Of 6), Viral | Viruses | 500 | 0.32 | Binding ≤ 10μM |
| Z50606-1-O | Hepatitis B Virus (cluster #1 Of 1), Other | Other | 7000 | 0.26 | Binding ≤ 10μM |
| Uniprot | Swissprot | Description | Affinity (nM) | LE (kcal/mol/atom) | Type |
|---|---|---|---|---|---|
| DPOLA_HUMAN | P09884 | DNA Polymerase Alpha Subunit, Human | 800 | 0.30 | Binding ≤ 1μM |
| DPOLB_HUMAN | P06746 | DNA Polymerase Beta, Human | 1000 | 0.30 | Binding ≤ 1μM |
| Z50606 | Z50606 | Hepatitis B Virus | 500 | 0.32 | Binding ≤ 1μM |
| Q72547_9HIV1 | Q72547 | Human Immunodeficiency Virus Type 1 Reverse Transcriptase, 9hiv1 | 500 | 0.32 | Binding ≤ 1μM |
| DPOLA_HUMAN | P09884 | DNA Polymerase Alpha Subunit, Human | 800 | 0.30 | Binding ≤ 10μM |
| DPOLB_HUMAN | P06746 | DNA Polymerase Beta, Human | 1000 | 0.30 | Binding ≤ 10μM |
| DPOG1_HUMAN | P54098 | DNA Polymerase Gamma Subunit 1, Human | 2000 | 0.28 | Binding ≤ 10μM |
| Z50606 | Z50606 | Hepatitis B Virus | 500 | 0.32 | Binding ≤ 10μM |
| Q72547_9HIV1 | Q72547 | Human Immunodeficiency Virus Type 1 Reverse Transcriptase, 9hiv1 | 500 | 0.32 | Binding ≤ 10μM |
| Description | Species |
|---|---|
| Activation of the pre-replicative complex | |
| Base-free sugar-phosphate removal via the single-nucleotide replacement pathway | |
| DNA replication initiation | |
| E2F mediated regulation of DNA replication | |
| G1/S-Specific Transcription | |
| Inhibition of replication initiation of damaged DNA by RB1/E2F1 | |
| Leading Strand Synthesis | |
| Polymerase switching | |
| Polymerase switching on the C-strand of the telomere | |
| Processive synthesis on the lagging strand | |
| Removal of DNA patch containing abasic residue | |
| Removal of the Flap Intermediate | |
| Resolution of AP sites via the single-nucleotide replacement pathway | |
| Telomere C-strand synthesis initiation |
