UCSF

ZINC28648064

Substance Information

In ZINC since Heavy atoms Benign functionality
March 5th, 2009 24 Yes

Download: MOL2 SDF SMILES Flexibase

Physical Representations

Type pH range xlogP Des A‑Pol Apolar desolvation (kcal/mol) Des Pol Polar desolvation (kcal/mol) H Don H-bond donors H Acc H-bond acceptors Chg Net charge tPSA (Ų) MWT Molecular weight (g/mol) RB Rotatable bonds DL
Ref Reference (pH 7) 3.29 9.38 -70.64 2 5 0 76 328.412 10
Mid Mid (pH 6-8) 3.29 8.91 -51.05 1 5 -1 74 327.404 10
Lo Low (pH 4.5-6) 3.29 8.26 -39.51 3 5 1 73 329.42 10

Activity (Go SEA)

Clustered Target Annotations
Code Description Organism Class Affinity (nM) LE (kcal/mol/atom) Type
ITAV-1-E Vitronectin Receptor Alpha (cluster #1 Of 1), Eukaryotic Eukaryotes 4360 0.31 Binding ≤ 10μM
ITB1-1-E Fibronectin Receptor Beta (cluster #1 Of 2), Eukaryotic Eukaryotes 102 0.41 Binding ≤ 10μM
ITB5-1-E Integrin Beta-5 (cluster #1 Of 1), Eukaryotic Eukaryotes 33 0.44 Binding ≤ 10μM
ITB6-1-E Integrin Beta-6 (cluster #1 Of 1), Eukaryotic Eukaryotes 4360 0.31 Binding ≤ 10μM
Z104292-1-O Integrin Alpha-V/beta-3 (cluster #1 Of 1), Other Other 51 0.43 Binding ≤ 10μM
ChEMBL Target Annotations
Uniprot Swissprot Description Affinity (nM) LE (kcal/mol/atom) Type
ITB1_HUMAN P05556 Fibronectin Receptor Beta, Human 102 0.41 Binding ≤ 1μM
Z104292 Z104292 Integrin Alpha-V/beta-3 21 0.45 Binding ≤ 1μM
ITB5_HUMAN P18084 Integrin Beta-5, Human 33 0.44 Binding ≤ 1μM
ITAV_HUMAN P06756 Vitronectin Receptor Alpha, Human 102 0.41 Binding ≤ 1μM
ITB1_HUMAN P05556 Fibronectin Receptor Beta, Human 102 0.41 Binding ≤ 10μM
Z104292 Z104292 Integrin Alpha-V/beta-3 21 0.45 Binding ≤ 10μM
ITB5_HUMAN P18084 Integrin Beta-5, Human 33 0.44 Binding ≤ 10μM
ITB6_HUMAN P18564 Integrin Beta-6, Human 4360 0.31 Binding ≤ 10μM
ITAV_HUMAN P06756 Vitronectin Receptor Alpha, Human 102 0.41 Binding ≤ 10μM

Reactome Annotations from Targets (via Uniprot)

Description Species
Basigin interactions
Cell surface interactions at the vascular wall
CHL1 interactions
Cross-presentation of particulate exogenous antigens (phagosomes)
ECM proteoglycans
Elastic fibre formation
Fibronectin matrix formation
Immunoregulatory interactions between a Lymphoid and a non-Lymphoid cell
Integrin cell surface interactions
Laminin interactions
Localization of the PINCH-ILK-PARVIN complex to focal adhesions
Molecules associated with elastic fibres
Other semaphorin interactions
PECAM1 interactions
Platelet Adhesion to exposed collagen
Signal transduction by L1
Smooth Muscle Contraction
Syndecan interactions
VEGFA-VEGFR2 Pathway

Analogs ( Draw Identity 99% 90% 80% 70% )