UCSF

ZINC03979155

Physical Representations

Type pH range xlogP Des A‑Pol Apolar desolvation (kcal/mol) Des Pol Polar desolvation (kcal/mol) H Don H-bond donors H Acc H-bond acceptors Chg Net charge tPSA (Ų) MWT Molecular weight (g/mol) RB Rotatable bonds DL
Ref Reference (pH 7) 1.53 3.91 -13.24 2 7 0 102 364.357 1
Hi High (pH 8-9.5) 2.28 3.5 -56.32 2 7 0 102 364.357 1
Hi High (pH 8-9.5) 2.28 4.82 -55.03 2 7 0 104 364.357 1

Vendor Notes

Note Type Comments Provided By
mechanism Inhibitor of DNA enzyme topoisomerase I ZereneX Building Blocks
Purity 98% APIChem
Therapy antineoplastic SMDC MicroSource
biological_use Cytostatic IBScreen Bioactives
mechanism Inhibitor of DNA enzyme topoisomerase I IBScreen Bioactives
biological_source Minor alkaloid from Camptotheca acuminata (Nyssaceae) ZereneX Building Blocks
Target Topoisomerase Selleck Chemicals
mechanism Topoisomerase I inhibitor IBScreen Bioactives
biological_use Used in cancer chemotherapy ZereneX Building Blocks

Activity (Go SEA)

Clustered Target Annotations
Code Description Organism Class Affinity (nM) LE (kcal/mol/atom) Type
TOP1-1-E DNA Topoisomerase 1 (cluster #1 Of 2), Eukaryotic Eukaryotes 110 0.36 Binding ≤ 10μM
Z80099-1-O COLO 205 (Colon Adenocarcinoma Cells) (cluster #1 Of 3), Other Other 9 0.42 Functional ≤ 10μM
Z80156-2-O HL-60 (Promyeloblast Leukemia Cells) (cluster #2 Of 12), Other Other 410 0.33 Functional ≤ 10μM
Z80166-1-O HT-29 (Colon Adenocarcinoma Cells) (cluster #1 Of 12), Other Other 9 0.42 Functional ≤ 10μM
Z80186-1-O K562 (Erythroleukemia Cells) (cluster #1 Of 11), Other Other 4100 0.28 Functional ≤ 10μM
Z80193-2-O L1210 (Lymphocytic Leukemia Cells) (cluster #2 Of 12), Other Other 18 0.40 Functional ≤ 10μM
Z80362-1-O P388 (Lymphoma Cells) (cluster #1 Of 8), Other Other 12 0.41 Functional ≤ 10μM
Z80682-1-O A549 (Lung Carcinoma Cells) (cluster #1 Of 11), Other Other 110 0.36 Functional ≤ 10μM
Z80697-1-O Bel-7402 (Hepatoma Cells) (cluster #1 Of 3), Other Other 280 0.34 Functional ≤ 10μM
Z80928-1-O HCT-116 (Colon Carcinoma Cells) (cluster #1 Of 9), Other Other 148 0.35 Functional ≤ 10μM
Z81020-7-O HepG2 (Hepatoblastoma Cells) (cluster #7 Of 8), Other Other 981 0.31 Functional ≤ 10μM
Z81034-1-O A2780 (Ovarian Carcinoma Cells) (cluster #1 Of 10), Other Other 700 0.32 Functional ≤ 10μM
Z81072-1-O Jurkat (Acute Leukemic T-cells) (cluster #1 Of 10), Other Other 30 0.39 Functional ≤ 10μM
Z81115-2-O KB (Squamous Cell Carcinoma) (cluster #2 Of 6), Other Other 829 0.32 Functional ≤ 10μM
ChEMBL Target Annotations
Uniprot Swissprot Description Affinity (nM) LE (kcal/mol/atom) Type
TOP1_HUMAN P11387 DNA Topoisomerase I, Human 110 0.36 Binding ≤ 1μM
TOP1_HUMAN P11387 DNA Topoisomerase I, Human 110 0.36 Binding ≤ 10μM
Z81034 Z81034 A2780 (Ovarian Carcinoma Cells) 700 0.32 Functional ≤ 10μM
Z80682 Z80682 A549 (Lung Carcinoma Cells) 110 0.36 Functional ≤ 10μM
Z80697 Z80697 Bel-7402 (Hepatoma Cells) 2470 0.29 Functional ≤ 10μM
Z80099 Z80099 COLO 205 (Colon Adenocarcinoma Cells) 9.1 0.42 Functional ≤ 10μM
Z80928 Z80928 HCT-116 (Colon Carcinoma Cells) 148 0.35 Functional ≤ 10μM
Z81020 Z81020 HepG2 (Hepatoblastoma Cells) 3700 0.28 Functional ≤ 10μM
Z80156 Z80156 HL-60 (Promyeloblast Leukemia Cells) 40 0.38 Functional ≤ 10μM
Z80166 Z80166 HT-29 (Colon Adenocarcinoma Cells) 210 0.35 Functional ≤ 10μM
Z81072 Z81072 Jurkat (Acute Leukemic T-cells) 30 0.39 Functional ≤ 10μM
Z80186 Z80186 K562 (Erythroleukemia Cells) 160 0.35 Functional ≤ 10μM
Z81115 Z81115 KB (Squamous Cell Carcinoma) 600 0.32 Functional ≤ 10μM
Z80193 Z80193 L1210 (Lymphocytic Leukemia Cells) 18 0.40 Functional ≤ 10μM
Z80362 Z80362 P388 (Lymphoma Cells) 12 0.41 Functional ≤ 10μM

Analogs ( Draw Identity 99% 90% 80% 70% )