UCSF

ZINC04693574

Substance Information

In ZINC since Heavy atoms Benign functionality
December 30th, 2005 24 Yes

Other Names:

( -)-Omeprazole

( -)-Omeprazole; 1H-Benzimidazole, 5-methoxy-2-(((4-methoxy-3,5-dimethyl-2-pyridinyl)methyl)sulfinyl)-; 2-(((3,5-Dimethyl-4-methoxy-2-pyridyl)methyl)sulfinyl)-5-methoxy-1H-benzimidazole; 2-({[3,5-dimethyl-4-(methyloxy)pyridin-2-yl]methyl}sulfinyl)-5-(meth

( -)-Omeprazole;(-)-Omeprazole;(S)-(-)-Omeprazole;(S)-Omeprazole;2,3,5-Trimethylpyridine/Omeprazole;Antra;Antra MUPS;Audazol;Aulcer;Belmazol;Ceprandal;Danlox;Demeprazol;Desec;Dizprazol;Dudencer;Elgam;Emeproton;Epirazole;Erbolin;Esomeprazole;Esomperazole;E

(-)-Omeprazole;(S)-Omeprazole;Esomperazole

(R)-5-Methoxy-2-(((4-methoxy-3,5-dimethylpyridin-2-yl)methyl)sulfinyl)-1H-benzo[d]imidazole

(R)-OmeprazoleSodiumSalt

(S)-6-Methoxy-2-(((4-methoxy-3,5-dimethylpyridin-2-yl)methyl)sulfinyl)-1H-benzo[d]imidazole

prazole

119141-89-8

131959-78-9

172964-80-6

1H-Benzimidazole, 5-methoxy-2-(((4-methoxy-3,5-dimethyl-2-pyridinyl)methyl)sulfinyl)-

1H-Benzimidazole, 5-methoxy-2-(((4-methoxy-3,5-dimethyl-2-pyridinyl)methyl)sulfinyl)-, sodium salt; 5-Methoxy-2-(((4-methoxy-3,5-dimethyl-2-pyridyl)methyl)sulfinyl)benzimidazole, sodium salt; Andra; H 168/68 sodium; LS-33032; Losec Sodium; Omeprazole sodi

1H-Benzimidazole, 5-methoxy-2-((S)-((4-methoxy-3,5-dimethyl-2-pyridinyl)methyl)sulfinyl)-, magnesium salt, trihydrate; 5-Methoxy-2-((S)-((4-methoxy-3,5-dimethyl-2-pyridyl)methyl)sulfinyl)benzimidazole, magnesium salt (2:1), trihydrate; Esomeprazole Magnes

2-(((3,5-Dimethyl-4-methoxy-2-pyridyl)methyl)sulfinyl)-5-methoxy-1H-benzimidazole

2-({[3,5-dimethyl-4-(methyloxy)pyridin-2-yl]methyl}sulfinyl)-5-(methyloxy)-1H-benzimidazole

5-Methoxy-2-(((4-methoxy-3,5-dimethyl-2-pyridinyl)methyl)sulfinyl)-1H-benzimidazole, magnesium salt (2:1); 5-Methoxy-2-(((4-methoxy-3,5-dimethyl-2-pyridyl)methyl)sulfinyl)benzimidazole, magnesium salt (2:1); H 168/68 magnesium; LS-186512; Omeprazole magne

5-Methoxy-2-(((4-methoxy-3,5-dimethyl-2-pyridyl)methyl)sulfinyl)benzimidazole

5-Methoxy-2-(4-methoxy-3,5-dimethyl-pyridin-2-ylmethanesulfinyl)-1H-benzoimidazole

5-methoxy-2-[(4-methoxy-3,5-dimethylpyridin-2-yl)methanesulfinyl]-1H-1,3-benzodiazole

5-methoxy-2-[(4-methoxy-3,5-dimethylpyridin-2-yl)methanesulfinyl]-3H-1,3-benzodiazole

5-Methoxy-2-[[(4-methoxy-3,5-dimethyl-2-pyridinyl)methyl]sulfinyl]-1H-benzimidazole

5-methoxy-2-{[(4-methoxy-3,5-dimethylpyridin-2-yl)methyl]sulfinyl}-1H-benzimidazole

5-Methoxy-2[(4-methoxy-3,5-dimethyl-2-pyridyl)methylsulfinyl]-1H-benzimidazole

6-methoxy-2-[(4-methoxy-3,5-dimethylpyridin-2-yl)methylsulfinyl]-1H-benzimidazole

6-methoxy-2-{[(4-methoxy-3,5-dimethylpyridin-2-yl)methyl]sulfinyl}-1H-benzimidazole

680

73590-58-6

73590-58-6; C07324; Omeprazole

73590-58-6; Omeprazole; Prestwick_808

95510-70-6; D01207; Losec sodium (TN); Omeprazole sodium (USAN)

AC-401

AC1L1IIJ

AGI-010

AKOS005066653

Antra

Antra MUPS

Antra

Audazol

Aulcer

Axagon

BAN

Belmazol

BIDD:GT0189

Bio-0888

BPBio1_000425

BRD-A55962179-001-04-9

BSPBio_000385

C07324

CAS-73590-58-6

CCRIS 7099

Ceprandal

CHEBI:519601

CHEBI:7772

CHEMBL1503

CID4594

CPD000058847

CPD000058847; OMEPRAZOLE; SAM001246900

CPD000469280; ESOMEPRAZOLE Mg

CPD000469280; ESOMEPRAZOLE Mg; Esomeprazole; SAM001246538

CPD000469280; ESOMEPRAZOLE Mg; SAM001246538

D00455

D05261; Omepral (TN); Omeprazole sodium hydrate; Omeprazole sodium injection (JAN)

Danlox

DAP000180

DB00338

DB00736

Demeprazol

Desec

Dizprazol

DM-3458

Dudencer

Elgam

Emeproton

Emilok

Epirazole

Erbolin

esomeprazol

Esomeprazole

Esomeprazole magnesium

Esomeprazole magnesium trihydrate

Esomeprazole potassium

Esomeprazole Sodium

Esomeprazole(Mg)

EsomeprazoleMagnesium

Esomeprazolepotassium

Esomperazole

Esopral

Exter

FDA

Gasec

Gastrimut

Gastroloc

Gibancer

H 168-68

H 168/68

H 168/68; H-168/68; H 168/68 Magnesium; H 168/68 Sodium

H-168/68

H168/68

HMS1528I05

HMS1569D07

HMS2052G17

HMS2090E16

HMS2090F11

HSDB 3575

I06-0705

IDI1_032523

Indurgan

Inhibitron

Inhipump

INN

JAN

Lensor

Logastric

Lomac

Losec

Losec, Omesec, Prilosec, Zegerid

Losec, Omesec, Prilosec, Zegerid, Omeprazole

LS-190136

LS-7629

Lucen

Magnesium, bis[6-methoxy-2-[(S)-[(4-methoxy-3,5-dimethyl-2-pyridinyl)methyl]sulfinyl-?O]-1H-benzimidazolato-?N3]-, (T-4)-

Maybridge4_002645

Mepral

MFCD00002233

MFCD00083192

MFCD01939422

MFCD06797997

MFCD06798050

MFCD07698573

MFCD07802816

Miol

Miracid

MLS000069373

MLS001076112

MLS001424148

MolPort-003-666-741

MolPort-003-807-515

MolPort-003-849-702

Mopral

Morecon

NCGC00016925-01

NCGC00016925-02

NCGC00021522-03

NCGC00021522-04

NCGC00021522-05

Nexium

Nexium IV

Nilsec

Nopramin

Nuclosina

O0359

O104_SIGMA

Ocid

Olexin

Olit

Omapren

Omebeta

Omebeta 20

Omed

Omegast

OMEP

Omepradex

Omepral

Omeprazen

Omeprazol

Omeprazol [INN-Spanish]

Omeprazole (BAN

Omeprazole (FDA

Omeprazole (JAN/USP/INN)

Omeprazole (Prilosec)

Omeprazole delayed-release

Omeprazole magnesium

OMEPRAZOLE SODIUM

Omeprazole sodium hydrate

Omeprazole [USAN:INN:BAN:JAN]

Omeprazolum

Omeprazolum [INN-Latin]

Omeprazon

Omeprazone

Omeprol

Omerprazole

Omesek

Omez

Omezol

Omezolan

Omid

Omisec

Omizac

OMP

Ompanyt

OMZ

Ortanol

Osiren

Ozoken

Paprazol

Parizac

Pepticum

Pepticus

Peptilcer

Prazentol

Prazidec

Prazolit

Prestwick0_000493

Prestwick1_000493

Prestwick2_000493

Prestwick3_000493

Prestwick_808

Prilosec

Prilosec (TN)

Prilosec OTC

Procelac

Proclor

Prysma

QA-9785

Ramezol

Regulacid

Result

S1389_Selleck

SAM001246900

SAN-15

Sanamidol

Secrepina

SMR000058847

sodium 6-methoxy-2-[(4-methoxy-3,5-dimethyl-2-pyridinyl)methylsulfinyl]-3aH-benzimidazole

sodium 6-methoxy-2-[(4-methoxy-3,5-dimethyl-2-pyridyl)methylsulfinyl]-3aH-benzimidazole

SPBio_002306

STK623746

Tedec Ulceral

TL8005099

Ulceral

Ulcesep

Ulcometion

Ulcozol

Ulcsep

Ulsen

Ultop

Ulzol

UNII-KG60484QX9

UPCMLD-DP075

UPCMLD-DP075:001

USAN

USAN); Omeprazole Sodium (USAN)

USP); Omeprazole Magnesium (FDA

Victrix

Zefxon

Zegerid

Zepral

Zimor

Zoltum

Download: MOL2 SDF SMILES Flexibase

Annotations

Vendors

Physical Representations

Type pH range xlogP Des A‑Pol Apolar desolvation (kcal/mol) Des Pol Polar desolvation (kcal/mol) H Don H-bond donors H Acc H-bond acceptors Chg Net charge tPSA (Ų) MWT Molecular weight (g/mol) RB Rotatable bonds DL
Ref Reference (pH 7) 2.41 4.06 -43.78 2 6 1 78 346.432 5
Hi High (pH 8-9.5) 2.41 3.62 -13.05 1 6 0 77 345.424 5

Vendor Notes

Note Type Comments Provided By
Molecular_Solubility 4.609 Bitter DB
ALOGPS_SOLUBILITY 3.59e-01 g/l DrugBank-approved
purity 9.500000000000000e+001 Enamine Building Blocks Enamine Building Blocks
biological_use Antiulcer agent IBScreen Bioactives
Indications antiulcerative KeyOrganics Bioactives
Indications antiulcerative, gastroesophageal reflux disease (GERD) KeyOrganics Bioactives
Therapy gastric acid depressant SMDC Iconix
therap gastric acid secretion inhibitor MicroSource US Drugs
mechanism Inhibits gastric acid secretion IBScreen Bioactives
PUBCHEM_SUBSTANCE_COMMENT NCC_SAMPLE_SUPPLIER : Sequoia Research Products Ltd.; NCC_SUPPLIER_STRUCTURE_ID : SRP01485e NIH Clinical Collection via PubChem
PUBCHEM_SUBSTANCE_COMMENT NCC_SAMPLE_SUPPLIER : Sigma Chemical Company; NCC_SUPPLIER_STRUCTURE_ID : O104 NIH Clinical Collection via PubChem
mechanism Proton pump inhibitor IBScreen Bioactives IBScreen Bioactives
Target Proton Pump, ATPase Selleck Chemicals
PUBCHEM_SUBSTANCE_COMMENT SAMPLE_SUPPLIER: Sequoia Research Products Ltd.; SUPPLIER_STRUCTURE_ID: SRP01485e NIH Clinical Collection via PubChem
PUBCHEM_SUBSTANCE_COMMENT SAMPLE_SUPPLIER: Sigma Chemical Company; SUPPLIER_STRUCTURE_ID: O104 NIH Clinical Collection via PubChem

Activity (Go SEA)

Clustered Target Annotations
Code Description Organism Class Affinity (nM) LE (kcal/mol/atom) Type
ATP4A-1-E Potassium-transporting ATPase Alpha Chain 1 (cluster #1 Of 1), Eukaryotic Eukaryotes 501 0.37 Binding ≤ 10μM
ATP4B-1-E Potassium-transporting ATPase Beta Chain (cluster #1 Of 1), Eukaryotic Eukaryotes 501 0.37 Binding ≤ 10μM
ATP4A-1-E Potassium-transporting ATPase Alpha Chain 1 (cluster #1 Of 2), Eukaryotic Eukaryotes 370 0.38 Functional ≤ 10μM
ATP4B-1-E Potassium-transporting ATPase Beta Chain (cluster #1 Of 2), Eukaryotic Eukaryotes 370 0.38 Functional ≤ 10μM
ChEMBL Target Annotations
Uniprot Swissprot Description Affinity (nM) LE (kcal/mol/atom) Type
ATP4A_HUMAN P20648 Potassium-transporting ATPase Alpha Chain 1, Human 501.187234 0.37 Binding ≤ 1μM
ATP4B_HUMAN P51164 Potassium-transporting ATPase Beta Chain, Human 501.187234 0.37 Binding ≤ 1μM
ATP4A_HUMAN P20648 Potassium-transporting ATPase Alpha Chain 1, Human 2000 0.33 Binding ≤ 10μM
ATP4A_PIG P19156 Potassium-transporting ATPase Alpha Chain 1, Pig 3800 0.32 Binding ≤ 10μM
ATP4B_HUMAN P51164 Potassium-transporting ATPase Beta Chain, Human 2000 0.33 Binding ≤ 10μM
ATP4B_PIG P18434 Potassium-transporting ATPase Beta Chain, Pig 3800 0.32 Binding ≤ 10μM
ATP4A_HUMAN P20648 Potassium-transporting ATPase Alpha Chain 1, Human 250 0.39 Functional ≤ 10μM
ATP4B_HUMAN P51164 Potassium-transporting ATPase Beta Chain, Human 250 0.39 Functional ≤ 10μM

Reactome Annotations from Targets (via Uniprot)

Description Species
Ion transport by P-type ATPases

Analogs ( Draw Identity 99% 90% 80% 70% )

No pre-computed analogs available. Try a structural similarity search.