UCSF

ZINC34676245

Substance Information

In ZINC since Heavy atoms Benign functionality
September 21st, 2009 7 No

CAS Numbers: 68-39-3 , 68-41-7 , [68-39-3] , [68-41-7]

Other Names:

"D-Cycloserine, 98%"

α (+)-4-Amino-3-isoxazolidinone; (+)-4-Amino-3-oxazolidinone; (+)-cycloserine; (+-)-4-Amino-3-isossazolidone [Italian]; (+-)-4-Amino-3-isoxazolidinone; (+-)-oxamicina [italian]; (-)-4-Amino-3-isossazolidone [Italian]; (1)-4-Amino-3-isoxazolidone; (4

α (+)-4-Amino-3-isoxazolidinone; (+)-4-Amino-3-oxazolidinone; (+)-cycloserine; (+-)-4-Amino-3-isossazolidone [Italian]; (+-)-4-Amino-3-isoxazolidinone; (+-)-oxamicina [italian]; (-)-4-Amino-3-isossazolidone [Italian]; (4R)-4-amino-1,2-oxazolidin-3-o

(+)-4-Amino-3-isoxazolidinone

(+)-4-amino-3-isoxazolidinone zwitterion; (4R)-4-aminoisoxazolidin-3-one zwitterion; D-4-amino-3-isoxazolidinone zwitterion; alpha-cycloserine zwitterion; cycloserine zwitterion

(+)-4-amino-3-isoxazolidinone; (+)-cycloserine; (4R)-4-aminoisoxazolidin-3-one; (R)-4-AMINO-ISOXAZOLIDIN-3-ONE; D-(+)-cycloserine; D-4-amino-3-isoxazolidinone; D-4-amino-3-isoxazolidone; D-Cycloserine; DCS; PA 94; PA-94; Ro-1-9213; alpha-Cycloserine; cycl

(+)-Cycloserine

(-)-4-Amino-3-isossazolidone [Italian]; (S)-(-)-Cycloserine; (S)-4-Amino-3-isoxazolidinone; 3-Isoxazolidinone, 4-amino-, (L)-; 3-Isoxazolidinone, 4-amino-, (S)-; BRN 0080799; C3H6N2O2; Cyclo-L-serine; EINECS 206-427-0; L-4-Amino-3-isoxazolidinone; L-4-Ami

(4R)-4-amino-1,2-oxazolidin-3-one

(4R)-4-Amino-3-isoxazolidinone

(4R)-4-aminoisoxazolidin-3-one

(R)-(+)-4-Amino-3-isoxazolidinone

(R)-(+)-Cycloserine

(R)-3-Isoxazolidinone, 4-amino-

(R)-4-Amino-3-isoxazolidinone

(R)-4-Amino-3-isoxazolidone

(R)-4-Amino-isoxazolidin-3-one

(R)-4-Aminoisoxazolidin-3-one

(R)-Cycloserine

(S)-(-)-Cycloserine

1pb9

3-Isoxazolidinone, 4-amino- (9CI)

3-Isoxazolidinone, 4-amino-, (+)-

3-Isoxazolidinone, 4-amino-, (+)- (8CI)

3-Isoxazolidinone, 4-amino-, (4R)- (9CI)

3-Isoxazolidinone, 4-amino-, (R)

3-Isoxazolidinone, 4-amino-, (R)-

3-Isoxazolidinone, 4-amino-, D

3-Isoxazolidinone, 4-amino-, d-

3-Isoxazolidinone,4-amino-

30020_FLUKA

30020_SIGMA

4-27-00-05549 (Beilstein Handbook Reference)

4-amino-1,2-oxazolidin-3-one

4-Aminoisoxazolidin-3-one

4AX

68-41-7

68-41-7; C08057; Cycloserine; D-Cycloserine

68-41-7; CPD-2482; D-4-amino-3-isoxazolidinone; D-4-amino-3-isoxazolidone; D-cycloserine; Seromycin; orientomycin

68-41-7; CPD000058313; D-CYCLOSERINE; SAM002264599

68-41-7; Cycloserine (JP16/USP/INN); D00877; Seromycin (TN)

AB00443920

AC-4721

AC1L1M33

AC1Q4UA7

AI3-50153

alpha-Cycloserine

alpha-Cycloserine;Cicloserina;D-CS;D-Cycloserine;D-Cycloserine synth. BP 88;D-Cycloserine, synthetic;D-Oxamicina;D-Oxamycin;DL-Cycloserine;L-Cycloserine

Antibiotic 106-7

Antibiotic 17452

Antibiotic 5915

Antibiotic 8217

Antibiotic E 733A

Antibiotic I 1431

Antibiotic K 300

Antibiotic NJ 21

Antibiotic PA 94

Antibiotic Ro 1-9213

BB_NC-1631

BIDD:GT0707

BPBio1_001252

BRN 0080798

BSPBio_001138

BSPBio_002121

C 3909

C-9390

C-9400

C08057

C3909_SIGMA

C3H6N2O2

C6880_SIGMA

C7670_SIGMA

CAS-339-72-0

CAS-68-41-7

CHEBI:40009

CHEBI:4030

CHEMBL771

Cicloserina

Cicloserina [INN-Spanish]

Cicloserina [Italian]

cicloserina; cycloserine; cycloserinum

CID6234

Closerin

Closina

CPD-2482

CPD000058313

CPD000058313; Cycloserine; D-CYCLOSERINE; SAM002264599

CPD000058313; D-CYCLOSERINE; 68-41-7

Cyclo-D-serine

Cyclomycin

Cyclorin

Cycloserin

Cycloserine

Cycloserine (BAN

CYCLOSERINE (D)

Cycloserine (JP15/USP/INN)

CYCLOSERINE D-

Cycloserine [INN:BAN:JAN]

Cycloserinum

Cycloserinum [INN-Latin]

D- Cycloserine

D-(+)-Cycloserine

D-4-Amino-3-isossazolidone

D-4-Amino-3-isossazolidone [Italian]

D-4-Amino-3-isoxazolidinone

D-4-amino-3-isoxazolidone

D-amino-3-isoxazolidinone

D-CS

D-Cycloserine synth. BP 88

D-cycloserine zwitterion

D-Cycloserine [68-41-7]

D-Cycloserine, 98%

D-Cycloserine, 98+%

D-Cycloserine, Streptomyces orchidaceus

D-Cycloserine, synthetic

D-CYCLOSERINE; [68-41-7]

D-Oxamicina

D-Oxamycin

D00877

DAP001335

DB03123

DivK1c_000098

DL-Cycloserine

DRG-0195

E-733-A

EINECS 200-688-4

EU-0100252

FA6C7F8B-D080-4EA3-978F-1ECFB5A29D09

Farmiserina

Farmiserine

FDA

HMS1571I20

HMS1920C06

HMS2051C15

HMS2091I14

HMS500E20

HSDB 3218

I-1431

IDI1_000098

INN

JAN

K-300

KBio1_000098

KBio2_001340

KBio2_003908

KBio2_006476

KBio3_001341

KBioGR_000890

KBioSS_001340

L-Cycloserine

LMPK14000007

LS-86757

MFCD00005353

MFCD00064323

Micoserina

Miroserina

Miroseryn

MLS000758215

MLS001423962

MolPort-000-858-643

NA

NCGC00015213-01

NCGC00015213-02

NCGC00015213-03

NCGC00016306-01

NCGC00016306-02

NCGC00016306-03

NCGC00016306-05

NCGC00093713-01

NCGC00093713-02

NINDS_000098

Novoserin

NSC 154851

OR-0991

Orientmycin

Orientomycin

Oxamicina

Oxamicina [Italian]

Oxamycin

Oxymycin

PA 94

PA-94

Prestwick0_001089

Prestwick1_001089

Prestwick2_001089

Prestwick3_001089

R(+)-4-Amino-3-isoxazolidinone

R-(+)-Cycloserine

R-4-Amino-3-isoxazolidinone

RO-1-9213

S1998_Selleck

SAM001247014

SAM002264599

SC-49088

Serine, cyclo-

Seromycin

Seromycin (TN)

SMP1_000167

SMR000058313

SPBio_000008

SPBio_003029

SPECTRUM1500215

Spectrum2_000084

Spectrum3_000371

Spectrum4_000305

Spectrum5_000797

Spectrum_000860

Tebemicina

Tisomycin

UNII-95IK5KI84Z

USP)

Wasserina

Download: MOL2 SDF SMILES Flexibase

Annotations

Vendors

Physical Representations

Type pH range xlogP Des A‑Pol Apolar desolvation (kcal/mol) Des Pol Polar desolvation (kcal/mol) H Don H-bond donors H Acc H-bond acceptors Chg Net charge tPSA (Ų) MWT Molecular weight (g/mol) RB Rotatable bonds DL
Ref Reference (pH 7) -1.71 -5.16 -42.02 3 4 0 72 102.093 0
Ref Reference (pH 7) -1.71 -6.26 -6.38 3 4 0 68 102.093 0
Hi High (pH 8-9.5) -1.71 -5.45 -42.88 2 4 -1 71 101.085 0
Mid Mid (pH 6-8) -1.90 -3.9 -7.02 3 4 0 64 102.093 0
Lo Low (pH 4.5-6) -1.71 -5.95 -48.42 4 4 1 69 103.101 0

Vendor Notes

Note Type Comments Provided By
biological_source Prod. by Streptomyces garyphalus, Streptomyces orchidaceus, Streptomyces lavendulae and Streptomyces nagasakiensis ZereneX Building Blocks
mechanism . ZereneX Building Blocks
MP 137 TCI
Melting_Point 137? dec. Alfa-Aesar
Melting_Point 137° dec. Alfa-Aesar
MP 138-141° Oakwood Chemical
MP 147 - 149 Enamine Building Blocks
M.P 147 °C Indofine
MP 147...149 Enamine Building Blocks
UniProt Database Links 2B11_HUMAN; 2B13_HUMAN; 2B14_HUMAN; 2B17_HUMAN; 2B18_HUMAN; 2B19_HUMAN; 2B1A_HUMAN; 2B1B_HUMAN; 2B1C_HUMAN; 2B1D_HUMAN; 2B1E_HUMAN; 2B1F_HUMAN; 2B1G_HUMAN; ALR_GEOSE; ALR_MYCAV; ALR_MYCSM; ALR_MYCTU; CD209_CHLAE; CD209_GORGO; CD209_HUMAN; CD209_HYLLA; CD2 ChEBI
ALOGPS_SOLUBILITY 8.77e+02 g/l DrugBank-approved
purity 9.500000000000000e+001 Enamine Building Blocks Enamine Building Blocks
Purity 95% Fluorochem
Purity 95+% Matrix Scientific
Purity 98% Fluorochem
UniProt Database Links ALR_MYCSM; DCSA_STRLA; DCSB_STRLA; DCSC_STRLA; DCSD_STRLA; DCSE_STRLA; DCSG_STRLA; LAAA_PSEAZ; LAAA_PSEFS; PAND_ECOLI; PAND_ECOLW; RSAM_PSESP; TCAA_STAA9 ChEBI
mechanism Antagonizes the role of D-alanine in bacterial cell-wall-synthesis IBScreen Bioactives
therap antibacterial (tuberculostatic) MicroSource Spectrum
Indications antibacterial, tuberculosis KeyOrganics Bioactives
Target Antifection Selleck Chemicals
PUBCHEM_PATENT_ID EP0948616A2; US5925354; WO1998018917A2 IBM Patent Data
Patent Database Links EP1588702; EP1685843; EP1884520; US2003082830; US2003105066; US2005020659; US2006128963; US2007202051; US2007207222; US2007265319; US2007269539; WO2005009950; WO2005066135; WO2005066143; WO2006113140; WO2007089745; WO2007103687; WO2007109180; WO2007117509 ChEBI
Therapy Excitatory amino acid; partial agonist at the glycine modulatory site of the NMDA glutamate receptor SMDC Pharmakon
mechanism Inhibits cell-wall-synthesis in: Mycobacterium tuberculosis IBScreen Bioactives IBScreen Bioactives
Warnings IRRITANT Matrix Scientific
PUBCHEM_SUBSTANCE_COMMENT NCC_SAMPLE_SUPPLIER : LightBiologicals; NCC_SUPPLIER_STRUCTURE_ID : C-3119 NIH Clinical Collection via PubChem
Target Others Selleck Chemicals
PUBCHEM_SUBSTANCE_COMMENT SAMPLE_SUPPLIER: LightBiologicals; SUPPLIER_STRUCTURE_ID: C-3119 NIH Clinical Collection via PubChem
biological_use Shows antibiotic activity primarily against mycobacteria IBScreen Bioactives IBScreen Bioactives
mechanism Susceptible strains of gram-negative bacteria IBScreen Bioactives
mechanism Susceptible strains of gram-positive bacteria IBScreen Bioactives
biological_use Tuberculostatic IBScreen Bioactives

Activity (Go SEA)

Clustered Target Annotations
Code Description Organism Class Affinity (nM) LE (kcal/mol/atom) Type
NMDZ1-4-E Glutamate (NMDA) Receptor Subunit Zeta 1 (cluster #4 Of 6), Eukaryotic Eukaryotes 7370 1.03 Binding ≤ 10μM
Z104302-3-O Glutamate NMDA Receptor (cluster #3 Of 7), Other Other 2300 1.13 Binding ≤ 10μM
ChEMBL Target Annotations
Uniprot Swissprot Description Affinity (nM) LE (kcal/mol/atom) Type
NMDZ1_RAT P35439 Glutamate (NMDA) Receptor Subunit Zeta 1, Rat 7370 1.03 Binding ≤ 10μM
Z104302 Z104302 Glutamate NMDA Receptor 2300 1.13 Binding ≤ 10μM

Reactome Annotations from Targets (via Uniprot)

Description Species
CREB phosphorylation through the activation of CaMKII
EPHB-mediated forward signaling
Ras activation uopn Ca2+ infux through NMDA receptor
Unblocking of NMDA receptor, glutamate binding and activation

Analogs ( Draw Identity 99% 90% 80% 70% )