UCSF

ZINC03800706

Substance Information

In ZINC since Heavy atoms Benign functionality
September 26th, 2005 24 Yes

Other Names:

(+)-(S)-Citalopram oxalate

(+)-citalopram; (S)-citalopram; S(+)-citalopram; S-(+)-citalopram; escitalopram

(+)-Citalopram;(S)-Citalopram;Cipralex;Escitalopram;Lexapro;S(+)-Citalopram;S-(+)-Citalopram

(R)-Citalopram Oxalate

(R)-CitalopramOxalate

(S)-1-(3-(dimethylamino)propyl)-1-(4-fluorophenyl)-1,3-dihydroisobenzofuran-5-carbonitrile

1,3-Dihydro-1-(3-(dimethylamino)propyl)-1-(4-fluorophenyl)-5-isobenzofurancarbonitrile

1,3-dihydro[3,4]benzofuran-5-carbonitrile

1-(3-(Dimethylamino)propyl)-1,-(4-fluorophenyl)-1,3-dihydroisobenzofuran-5-carbonitrile monohydrobromide; 1-(3-(Dimethylamino)propyl)-1-(4-fluorophenyl)-1,3-dihydroisobenzofuran-5-carbonitrile monohydrobromide; 1-(3-(dimethylamino)propyl)-1-(p-fluoropheny

1-(3-(Dimethylamino)propyl)-1-(4-fluorophenyl)-1,3-dihydroisobenzofuran-5-carbonitrile hydrobromide

1-(3-(Dimethylamino)propyl)-1-(p-fluorophenyl)-5-phthalancarbonitrile

1-[3-(dimethylamino)propyl]-1-(4-fluorophenyl)-

1-[3-(dimethylamino)propyl]-1-(4-fluorophenyl)-1,3-dihydro-2-benzofuran-5-carbonitrile

1-[3-(dimethylamino)propyl]-1-(4-fluorophenyl)-1,3-dihydro-2-benzofuran-5-carbonitrile hydrochloride

1-[3-(Dimethylamino)propyl]-1-(4-fluorophenyl)-1,3-dihydro-5-isobenzofurancarbonitrile hydrobromide

1-[3-(dimethylamino)propyl]-1-(4-fluorophenyl)-3H-2-benzofuran-5-carbonitrile

128196-01-0; D07913; Escitalopram (INN); Esertia (TN)

5-Isobenzofurancarbonitrile, 1,3-dihydro-1-(3-(dimethylamino)propyl)-1-(4-fluorophenyl)-

5-Isobenzofurancarbonitrile, 1-(3-(dimethylamino)propyl)-1-(4-fluorophenyl)-1,3-dihydro-

5-Isobenzofurancarbonitrile, 1-(3-(dimethylamino)propyl)-1-(4-fluorophenyl)-1,3-dihydro-, (1S)-, ethanedioate (1:1); Escitalopram oxalate; Escitalopram oxalate [USAN]; LS-183519; Lexapro; Lu 26-054-0; S-(+)-1-(3-(Dimethylamino)propyl)-1-(p-fluorophenyl)-5

59729-32-7; Celexa (TN); Citalopram hydrobromide (USAN); D00822

59729-33-8

59729-33-8; C07572; Citalopram

85118-27-0; Citalopram hydrochloride; D07705; Seropram (TN)

AB00513896

AC-12214

AC1L1EFH

AE-641/00603021

Akarin

Apertia

BPBio1_000929

BRD-A47598013-004-02-0

BRD-K70301876-034-02-0

BSPBio_000843

C07572

C20H21FN2O

Celapram

Celexa

Celius

CHEBI:3723

CHEMBL549

Ciazil

CID2771

Cilift

Cimal

Cipralex

Cipram

Cipramil

Ciprapine

Citabax

Citadur

Citadur (TN)

Citalec

Citalopram

Citalopram (USP/INN)

Citalopram hydrochloride

Citalopram [Celexa]

Citalopram [INN:BAN]

Citalopramum

Citalopramum [INN-Latin]

Citol

Citopam

Citox

Citrol

CPD000465669

CPD000465669; Citalopram; SAM002589960

CPD000469191; ESCITALOPRAM OXALATE

Cytalopram

D07704

Dalsan

DAP000118

DB00215

DNC011094

EINECS 261-891-1

Elopram

Entact

Escitalopram

Escitalopram (BAN

Escitalopram Oxalate

escitalopram; escitalopramum

Escitalopramoxalate

Esertia

Gaudium

HMS2090O09

HMS2093A14

Humorup

I01-0382

InChI=1/C20H21FN2O/c1-23(2)11-3-10-20(17-5-7-18(21)8-6-17)19-9-4-15(13-22)12-16(19)14-24-20/h4-9,12H,3,10-11,14H2,1-2H3

INN); Escitalopram Oxalate (FDA

L001223

Lexapro

LS-190419

LS-84327

LS-84328

Lu 10-171

Lu-10-171

Lu-10-171B

LU-26-054-0

LU-260540

Lupram

MFCD00865398

MFCD02101306

MFCD04113069

MFCD06407826

MLD-55

MolPort-003-666-794

NA

NCGC00015267-07

NCGC00025160-02

Nitalapram

Oropram

Pramcit

Prestwick3_000692

Prisdal

QA-1178

Recital

S-(+)-Citalopram Oxalate

SAM002589960

Sepram

Seroplex

Seropram

ST069372

STL058639

Talam

Talohexal

Temperax

UNII-0DHU5B8D6V

USAN)

Vodelax

WSEQXVZVJXJVFP-UHFFFAOYSA-

ZD-211

Zentius

Zetalo

[3H]Citalopram

Download: MOL2 SDF SMILES Flexibase

Annotations

Vendors

Physical Representations

Type pH range xlogP Des A‑Pol Apolar desolvation (kcal/mol) Des Pol Polar desolvation (kcal/mol) H Don H-bond donors H Acc H-bond acceptors Chg Net charge tPSA (Ų) MWT Molecular weight (g/mol) RB Rotatable bonds DL
Ref Reference (pH 7) 3.17 11.27 -44.53 1 3 1 37 325.407 5

Vendor Notes

Note Type Comments Provided By
Target 5-HT Receptor Selleck Chemicals
ALOGPS_SOLUBILITY 5.88e-03 g/l DrugBank-approved
mechanism 5HT re-uptake inhibitor IBScreen Bioactives
purity 9.500000000000000e+001 Enamine Building Blocks
Purity 95% Fluorochem
Indications Antidepressant KeyOrganics Bioactives
biological_use Antidepressant Drug IBScreen Bioactives
Therapy antidepressant, 5HT reuptake inhibitor SMDC Iconix
Patent Database Links EP1298124; EP1988086; US2005065207; US2005065209; US2005147674; US2005154051; US2005154052; US2005197388; US2007190624; US2007203231; WO2005077891; WO2005084643; WO2006106531; WO2007100430 ChEBI
PUBCHEM_SUBSTANCE_COMMENT NCC_SAMPLE_SUPPLIER : LightBiologicals; NCC_SUPPLIER_STRUCTURE_ID : C-6178; NCC_SUPPLIER_SAMPLE_COMMENTS : WHITE CRYSTALLINE POWDER NIH Clinical Collection via PubChem
PUBCHEM_SUBSTANCE_COMMENT SAMPLE_SUPPLIER: LightBiologicals; SUPPLIER_STRUCTURE_ID: C-6178; SUPPLIER_COMMENTS: WHITE CRYSTALLINE POWDER NIH Clinical Collection via PubChem

Activity (Go SEA)

Clustered Target Annotations
Code Description Organism Class Affinity (nM) LE (kcal/mol/atom) Type
KCNH2-5-E HERG (cluster #5 Of 5), Eukaryotic Eukaryotes 5400 0.31 Binding ≤ 10μM
Q63380-1-E Transporter (cluster #1 Of 1), Eukaryotic Eukaryotes 5950 0.30 Binding ≤ 10μM
Q9WTR4-1-E Norepinephrine Transporter (cluster #1 Of 2), Eukaryotic Eukaryotes 6190 0.30 Binding ≤ 10μM
SC6A2-2-E Norepinephrine Transporter (cluster #2 Of 2), Eukaryotic Eukaryotes 6190 0.30 Binding ≤ 10μM
SC6A3-1-E Dopamine Transporter (cluster #1 Of 3), Eukaryotic Eukaryotes 3 0.50 Binding ≤ 10μM
SC6A3-1-E Dopamine Transporter (cluster #1 Of 3), Eukaryotic Eukaryotes 8150 0.30 Binding ≤ 10μM
SC6A4-1-E Serotonin Transporter (cluster #1 Of 4), Eukaryotic Eukaryotes 1 0.53 Binding ≤ 10μM
SC6A4-1-E Serotonin Transporter (cluster #1 Of 4), Eukaryotic Eukaryotes 3 0.50 Binding ≤ 10μM
Q9WTR4-1-E Norepinephrine Transporter (cluster #1 Of 2), Eukaryotic Eukaryotes 8800 0.29 Functional ≤ 10μM
SC6A4-1-E Serotonin Transporter (cluster #1 Of 1), Eukaryotic Eukaryotes 2 0.51 Functional ≤ 10μM
ChEMBL Target Annotations
Uniprot Swissprot Description Affinity (nM) LE (kcal/mol/atom) Type
SC6A3_MOUSE Q61327 Dopamine Transporter, Mouse 2.9 0.50 Binding ≤ 1μM
SC6A4_HUMAN P31645 Serotonin Transporter, Human 1 0.53 Binding ≤ 1μM
SC6A4_RAT P31652 Serotonin Transporter, Rat 0.89 0.53 Binding ≤ 1μM
SC6A3_MOUSE Q61327 Dopamine Transporter, Mouse 2.9 0.50 Binding ≤ 10μM
SC6A3_RAT P23977 Dopamine Transporter, Rat 8150 0.30 Binding ≤ 10μM
KCNH2_HUMAN Q12809 HERG, Human 3981.07171 0.31 Binding ≤ 10μM
Q9WTR4_RAT Q9WTR4 Norepinephrine Transporter, Rat 6190 0.30 Binding ≤ 10μM
SC6A2_HUMAN P23975 Norepinephrine Transporter, Human 6190 0.30 Binding ≤ 10μM
SC6A4_RAT P31652 Serotonin Transporter, Rat 0.89 0.53 Binding ≤ 10μM
SC6A4_HUMAN P31645 Serotonin Transporter, Human 1 0.53 Binding ≤ 10μM
Q63380_RAT Q63380 Transporter, Rat 5950 0.30 Binding ≤ 10μM
Q9WTR4_RAT Q9WTR4 Norepinephrine Transporter, Rat 8800 0.29 Functional ≤ 10μM
SC6A4_RAT P31652 Serotonin Transporter, Rat 1.8 0.51 Functional ≤ 10μM

Reactome Annotations from Targets (via Uniprot)

Description Species
Dopamine clearance from the synaptic cleft
Na+/Cl- dependent neurotransmitter transporters
Voltage gated Potassium channels

Analogs ( Draw Identity 99% 90% 80% 70% )